Gene Avin_41270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_41270 
Symbol 
ID7763010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4162892 
End bp4163713 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID643806984 
ProductPeptidase M48, Ste24p family 
Protein accessionYP_002801235 
Protein GI226946162 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.234048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGT CGTTTTATCT CTCCGGTGTG GCCGCCGCCT TGCTGCTGGT CGCCTGCCAG 
CCCGTCCAGA CCACCAGTGG CGGCGCCGTG GGGGTCGAGC GCAAGCAGTA CATGTTCAGC
ATGCTCTCCA CCGAGCAGGT CAACCAGATG TACGCCCAGT CCTACCAGCA GACGCTGAGC
GAGGCTTCCG AGAAGGGGGT GCTGGATACC AGCAGCCAGA ATGCCCGGCG CCTGGACGAA
GTCGCTCGCC GGCTGATCGC CAAGGCACCG CTGTTCCGCG CCGATGCCGC GCAGTGGCAA
TGGGAGGTCG CGCTGATCGA CAGCGACGAG CTGAACGCCA GTTGCGGACC GGGCGGCAAG
ATCATTTTCT ACAACGGGCT GATCGAAAAG CTGCGGCTGA CCGACGATGA GATCGCCGCG
GTCATGGGCC ACGAGATCGC CCATGCCTTG CGCGAGCACG GCCGCGAGGC GTTGTCCAAG
GCCTATGCCG TGGAAATGGC CAAGCAAGGC GCCAGTGCGC TGCTCGGGGT GGGGGAAGCC
AGCATGGCCA TGGCGGACGT GGCGGTGCAG TACGGCATGA CCCTGCCCAA CAGCCGCAGC
AACGAGAGCG AGGCGGATCT GATCGGCCTG GAGCTGGCCG CCCGTGCCGG CTACGACCCG
AACGCGGCGC TTACCTTGTG GCAGAAGATG AGCCAGGCGG AGAGCAACGG CACGCCGCAG
TTCATGAGTA CCCACCCCTC GCCGGGCAAC CGCACGGCGG CGCTGGAGGC GGCGATTCCC
AAGGTCATGC CGCTGTACCG CCAGGCCAAG GGCGGCAGCT GA
 
Protein sequence
MGKSFYLSGV AAALLLVACQ PVQTTSGGAV GVERKQYMFS MLSTEQVNQM YAQSYQQTLS 
EASEKGVLDT SSQNARRLDE VARRLIAKAP LFRADAAQWQ WEVALIDSDE LNASCGPGGK
IIFYNGLIEK LRLTDDEIAA VMGHEIAHAL REHGREALSK AYAVEMAKQG ASALLGVGEA
SMAMADVAVQ YGMTLPNSRS NESEADLIGL ELAARAGYDP NAALTLWQKM SQAESNGTPQ
FMSTHPSPGN RTAALEAAIP KVMPLYRQAK GGS