Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_41270 |
Symbol | |
ID | 7763010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4162892 |
End bp | 4163713 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643806984 |
Product | Peptidase M48, Ste24p family |
Protein accession | YP_002801235 |
Protein GI | 226946162 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.234048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGT CGTTTTATCT CTCCGGTGTG GCCGCCGCCT TGCTGCTGGT CGCCTGCCAG CCCGTCCAGA CCACCAGTGG CGGCGCCGTG GGGGTCGAGC GCAAGCAGTA CATGTTCAGC ATGCTCTCCA CCGAGCAGGT CAACCAGATG TACGCCCAGT CCTACCAGCA GACGCTGAGC GAGGCTTCCG AGAAGGGGGT GCTGGATACC AGCAGCCAGA ATGCCCGGCG CCTGGACGAA GTCGCTCGCC GGCTGATCGC CAAGGCACCG CTGTTCCGCG CCGATGCCGC GCAGTGGCAA TGGGAGGTCG CGCTGATCGA CAGCGACGAG CTGAACGCCA GTTGCGGACC GGGCGGCAAG ATCATTTTCT ACAACGGGCT GATCGAAAAG CTGCGGCTGA CCGACGATGA GATCGCCGCG GTCATGGGCC ACGAGATCGC CCATGCCTTG CGCGAGCACG GCCGCGAGGC GTTGTCCAAG GCCTATGCCG TGGAAATGGC CAAGCAAGGC GCCAGTGCGC TGCTCGGGGT GGGGGAAGCC AGCATGGCCA TGGCGGACGT GGCGGTGCAG TACGGCATGA CCCTGCCCAA CAGCCGCAGC AACGAGAGCG AGGCGGATCT GATCGGCCTG GAGCTGGCCG CCCGTGCCGG CTACGACCCG AACGCGGCGC TTACCTTGTG GCAGAAGATG AGCCAGGCGG AGAGCAACGG CACGCCGCAG TTCATGAGTA CCCACCCCTC GCCGGGCAAC CGCACGGCGG CGCTGGAGGC GGCGATTCCC AAGGTCATGC CGCTGTACCG CCAGGCCAAG GGCGGCAGCT GA
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Protein sequence | MGKSFYLSGV AAALLLVACQ PVQTTSGGAV GVERKQYMFS MLSTEQVNQM YAQSYQQTLS EASEKGVLDT SSQNARRLDE VARRLIAKAP LFRADAAQWQ WEVALIDSDE LNASCGPGGK IIFYNGLIEK LRLTDDEIAA VMGHEIAHAL REHGREALSK AYAVEMAKQG ASALLGVGEA SMAMADVAVQ YGMTLPNSRS NESEADLIGL ELAARAGYDP NAALTLWQKM SQAESNGTPQ FMSTHPSPGN RTAALEAAIP KVMPLYRQAK GGS
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