| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_41240 |
|---|
| Symbol | |
|---|
| ID | 7763007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4160223 |
|---|
| End bp | 4161224 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643806981 |
|---|
| Product | rRNA (guanine-N(2)-)-methyltransferase |
|---|
| Protein accession | YP_002801232 |
|---|
| Protein GI | 226946159 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0354958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGC GTAGCGAAGT GCTGTTGCGC CAGGTCGAGC TGTTCGGCGG CGACCTGCTG
CTGGCCGGCC TCCCGGCCGA CGACCTGCTC GGCCGGCTGC CCGCCGCCCA TGGCTGGAGC
TGGCACGCCG GAGAGCATGC GGCGCTGACC GCGCGCTTCG CCGGCCGCTG CCGGTTCGGC
GTCGCCCCCG ACGAGCGGCC CTTCGCCGCC GCCGTGCTGT TCCTGCCCAA GTCCGCCGAA
CTGGCCCGCT ACCTGCTCGA CAGCCTGGCC GCCCGCCTGC CCGGCGGCGA GTTGTACCTG
GTGGGGGAAA AGCGCGGCGG CATCGAGAGC GCCGCCCGCC AGTTGCAAGC CTTCGGCCGG
CCGCGCAAGC TGGACAGCGC CCGCCACTGC CAGTTGTGGC AAGTGACGGT GGAACAGGCG
CCAGCACTTC CCGTACTGGA GGAGCGCGCC CAGCGCTATC GGCTGCAAGC GACCGACGGC
CCGCTCGAAG TGGTCAGTCT GCCCGGGGTG TTCAGCCATG GCCGCCTCGA CCGCGGCACG
GCCCTGCTCC TCGAACGGCT CGACGGTCTG CCGCCGGGGG ATCTGCTCGA CTTCGGCTGC
GGTGCCGGGG TGCTCGGCGC GCTGCTCAAG CGGCGCTATC CGCAGAGCCG GGTGATCCTA
CTGGACGTCG ACGCCTTCGC CCTGGCCAGC AGTCGCCTGA CCTTGGCGGC CAACGGCCTG
GAAGCGCAGA CGATCGCCGG CGACGGCATC CGGGACGCGC CCGACGGACT GGCGGCGATC
GTCAGCAACC CACCGTTCCA CCAGGGCGTG CACACCGACT ACCGGGCCAC CGAGGACCTG
CTGCGCGAGG CCGCCCGGCA CCTGCGTCCC GGCGGCGAGC TGCGCCTGGT CGCCAACAGC
TTCCTCAAGT ATCCGCCGCT GATCGAGCGT CACCTCGGCC CCTGCCAGGT GCTCGCCGAA
GGAAACGGCT TTCGCGTCTA CCGCGCCGGA CGGGAACGCT GA
|
|---|
| Protein sequence | MDPRSEVLLR QVELFGGDLL LAGLPADDLL GRLPAAHGWS WHAGEHAALT ARFAGRCRFG
VAPDERPFAA AVLFLPKSAE LARYLLDSLA ARLPGGELYL VGEKRGGIES AARQLQAFGR
PRKLDSARHC QLWQVTVEQA PALPVLEERA QRYRLQATDG PLEVVSLPGV FSHGRLDRGT
ALLLERLDGL PPGDLLDFGC GAGVLGALLK RRYPQSRVIL LDVDAFALAS SRLTLAANGL
EAQTIAGDGI RDAPDGLAAI VSNPPFHQGV HTDYRATEDL LREAARHLRP GGELRLVANS
FLKYPPLIER HLGPCQVLAE GNGFRVYRAG RER
|
|---|
| |