Gene Avin_41230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_41230 
Symbol 
ID7763006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4159218 
End bp4160180 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content72% 
IMG OID643806980 
Productglycerate dehydrogenase 
Protein accessionYP_002801231 
Protein GI226946158 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0301751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAC GCCGCGCCGT CTTTCTCGAT CATGCCTCCC TCGATCTCGG CGACCTCGAT 
CTCTCCCCGT TGCGCCAGGC TTTCGACGAA CTGCTGCTGC ACGACGCCAG CAGCGCCGGC
GAGGTGGCCG GACGGCTGCG CGGCGTGCGG GTGGCGATCG CCAACAAGGT ACCGCTGGAC
GCGGACACCT TCGCCGCCTG TCCCGACCTG CGGCTGGTGC TGGTCGCCGC CACCGGCACC
AACAACGTCG ATCTCGCCGC CGCCCGGAGC CATGGCGTGA CGGTGTGCAA CTGCCAGGGC
TACGGCACGC CCTCGGTGGC CCAGCACACC CTGATGCTGC TGCTCGCCCT GGCCACCCGC
CTGCCCGACT ACCAGACGGC GATCCGCGCC GGCCGCTGGC AGCAGGCGGC GCAGTTCTGC
CTGCTGGACT TCCCCATCGT CGAACTGGAG GGCAAGACCC TCGGCCTGCT CGGCCACGGC
GAACTGGGCA GCGCCGTCGC CCGGCTCGCC GAAGCCTTCG GCATGCGCGT GCTGCTCGGC
CAGTTGCCGG GCCGTCCCGA ACGCGCCGAC CGCCTGCCGC TGGCCGAGCT GCTGCCGCAG
GTCGATGCGC TGACCCTGCA CTGCCCGCTG ACCGAGCAGA CCCGCAACCT GATCGGCGCC
GAACAATTGC AAGCGATGAA GCCCGGCGCC TTCCTGGTCA ACACCGGCCG CGGCGGACTG
GTCGACGAGC AGGCGCTGGC CGACACCCTG CGCCGCGGCC ACCTGGGCGG CGCGGCCTGC
GACGTGCTCA GCGAGGAACC GCCGCGCAAC GGCAATCCGC TGCTGGCGCC GGATATCCCG
CGGCTGATCC TCACTCCGCA CAGCGCCTGG GGCAGCCGCG AGGCGCGCCA GCGCATCGTC
GGCCAACTGG CGGAAAACGC CCTGGCCTAT TTCGCCGGCA CGCCGAAGCG CCGGATCGCC
TGA
 
Protein sequence
MNARRAVFLD HASLDLGDLD LSPLRQAFDE LLLHDASSAG EVAGRLRGVR VAIANKVPLD 
ADTFAACPDL RLVLVAATGT NNVDLAAARS HGVTVCNCQG YGTPSVAQHT LMLLLALATR
LPDYQTAIRA GRWQQAAQFC LLDFPIVELE GKTLGLLGHG ELGSAVARLA EAFGMRVLLG
QLPGRPERAD RLPLAELLPQ VDALTLHCPL TEQTRNLIGA EQLQAMKPGA FLVNTGRGGL
VDEQALADTL RRGHLGGAAC DVLSEEPPRN GNPLLAPDIP RLILTPHSAW GSREARQRIV
GQLAENALAY FAGTPKRRIA