Gene Avin_41180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_41180 
Symbol 
ID7763001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4151252 
End bp4151668 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content58% 
IMG OID643806975 
Productnuclease 
Protein accessionYP_002801226 
Protein GI226946153 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.804446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGCA AGGTCATCCG CGTACAGGAT GGCGACAGCC TGACCTGCCT GAGCAAAAGC 
AAACAACGCA TAGAGGTTCA ACTGGCCAAT ATCGATGCCC CGGAGCTGGT GCAGCCTTAT
GGCCAACTGG CACAACTGCA GCTTTTCCAT CTCGTCTACA ACCGGAACAT CAGGCTGGAT
GTACTCAGGC AGACACGTTA CGGCATAAAG CTGGCCAACA TCTATATCGG CGAGCGCCAT
ATCAACGCGG AAATGGTCCA GCAGGGCGCG GCCTGGGTTT CCAACGAAGC CAGCGACAGT
CCGCAGTTGC TATCGCTGGA AACGGAAGCC AGATCGCTCC AGCGTGGCCT CTGGGGACTG
CCGCTCCCCG AAATCATTCC GCCATGGCGT TGGCGCGCCA TGCCATCCGG CGAGTGA
 
Protein sequence
MTCKVIRVQD GDSLTCLSKS KQRIEVQLAN IDAPELVQPY GQLAQLQLFH LVYNRNIRLD 
VLRQTRYGIK LANIYIGERH INAEMVQQGA AWVSNEASDS PQLLSLETEA RSLQRGLWGL
PLPEIIPPWR WRAMPSGE