Gene Avin_41010 details

Gene Information

• Locus tag: Avin_41010
• Symbol: cstA
• ID: 7762986
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 4135700
• End bp: 4137757
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643806960
• Product: Carbon starvation protein
• Protein accession: YP_002801211
• Protein GI: 226946138
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1966] Carbon starvation protein, predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.425566
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGAC TGGTCTCTCA TCTCGCCTGG CTCGCCCTGG CGGTGCTGGG CGCCGCCGCC 
CTGGGTGTCG TGGCCCTACG GCGTGGCGAA GCCATCAATG CCTTGTGGAT CGTGGTCGCC 
GCGACGGCGA TCTATCTGGT CGCCTACCGC TACTACAGCC TGTTCATCGC CAACCGGGTG 
ATGCAGCTCG ATCCACGCCG CGCCACCCCG GCGGTGCTCA ACAACGATGG TCTGGATTTC 
GTGCCGACCA ACAAGCACGT GCTCTTCGGC CATCACTTCG CCGCCATCGC CGGCGCCGGC 
CCGCTGGTCG GCCCGGTGCT CGCCGCGCAG ATGGGCTACC TGCCCGGCAC CCTGTGGCTG 
ATCGCCGGGG TGGTGCTGGC CGGCGCGGTG CAGGATTTCC TGGTGCTGTG CATCTCCACC 
CGCCGCAACG CCCGCTCGCT GGGCGACATG GTGCGCGAGG AAATGGGCCG TGTTCCCGGC 
ACCATCGCGC TGTTCGGCTG TTTCCTGATC ATGATCATCA TCCTCGCGGT GCTGGCGCTG 
ATCGTGGTCA AGGCTCTGGC CCACAGTCCC TGGGGCATGT TCACGGTGAT CGCGACCATT 
CCGATCGCCA TGTTCATGGG CCTGTACATG CGCTACATCC GTCCCGGACG CATCGGCGAG 
ATCTCGCTGA TCGGCATCGT CCTGCTGCTG GCCTCGATCT GGCTGGGCGG CGTGATTTCC 
ACCGACCCCT ACTGGAGCGG AGTGTTCACC TTCAGCGGCG TGCAGATCAC CTGGATGCTG 
ATCGGCTACG GCTTCGTCGC CGCGGTGTTG CCGGTATGGC TGATCCTCGC CCCGCGCGAC 
TATCTGTCGA CCTTCCTGAA GATCGGCACC ATCGCCGCCC TGGCGGTCGG CATCGTGATC 
CTCAACCCCG ACCTGAAGAT GCCGGCGGTG ACCCAGTTCA TCGATGGTAG CGGTCCGGTG 
TGGAAGGGGG CGCTGTTTCC CTTCCTGTTC ATCACCATCG CCTGCGGCGC GGTGTCCGGC 
TTCCATGCGC TGATCGCCTC GGGTACCACG CCCAAGCTGC TGGCCAGCGA GGGCCACGCC 
CGCTACATCG GCTACGGCGG CATGCTGATG GAGTCGATGG TGGCGATCAT GGCCATGGTC 
GCCGCCGCGG TGATCGAGCC CGGCGTGTAC TTCGCCATGA ACAGCCCGCC GGCCATCGTC 
GGCGCCGATG CCGCCAGCGT GGCGGCGGCG GTCAGCGGCT GGGGTTTCGC CATCACGCCC 
GAAGCGCTGG AAAGCGTCGC CCGCGACATC GGCGAAACCA CCATCCTGGC GCGTGCCGGC 
GGTGCGCCGA CCCTGGCCGT GGGCATCGCG CAGATCCTCC ACCAGGTGCT GCCGGGGGCG 
ACCTCCATGG CGTTCTGGTA TCACTTCGCC ATTCTGTTCG AGGCGCTGTT CATCCTGACC 
GCCGTGGACG CCGGCACCCG CGCCGGGCGC TTCATGCTCC AGGACCTGCT CGGCAACTTC 
GTGCCGGTCC TGCGCCGCAC CGACTCCTGG GGCGCCAACG TACTGGCCAC CGCCGGTTGC 
GTGGCGCTCT GGGGCTATCT GCTGTACCAG GGCGTGGTCG ATCCGCTGGG CGGCATCAAC 
ACCCTGTGGC CGCTGTTCGG CATCTCCAAC CAGATGCTCG CCGGCATCGC CCTGATGCTC 
TGCAGCGTGG TGCTGATCAA GATGAAGCGC CAGAACTACG TCTGGGTCAC CCTGCTGCCG 
GCCGTCTGGC TGCTGATCTG CACCACGGTG GCGAGCCTGA TCAAGCTGTT CGATCCGAAC 
CCGGCGGTCG GCTTCCTCGC CCTGGCCAGC AAATACGCCG CGGCGATGGA CACCGGCCAG 
GTCCTGGCTC CGGCCAGGGA CATCGGCCAG ATGCAGAACG TGATCATGAA CGCCTATACC 
AACGCCGGTC TCAGCGTGCT GTTCCTGGTG GTGGTGTTCA GCATCCTGTT CTACTCGCTG 
AAGGTCGGCC GTGCCGCCTG GATCGTCGAG CAGCGCACCG ACAAGGAAAC GCCCTTCCAG 
GCGATTCCCG GCGCCTGA 

 

Protein sequence

MNRLVSHLAW LALAVLGAAA LGVVALRRGE AINALWIVVA ATAIYLVAYR YYSLFIANRV 
MQLDPRRATP AVLNNDGLDF VPTNKHVLFG HHFAAIAGAG PLVGPVLAAQ MGYLPGTLWL 
IAGVVLAGAV QDFLVLCIST RRNARSLGDM VREEMGRVPG TIALFGCFLI MIIILAVLAL 
IVVKALAHSP WGMFTVIATI PIAMFMGLYM RYIRPGRIGE ISLIGIVLLL ASIWLGGVIS 
TDPYWSGVFT FSGVQITWML IGYGFVAAVL PVWLILAPRD YLSTFLKIGT IAALAVGIVI 
LNPDLKMPAV TQFIDGSGPV WKGALFPFLF ITIACGAVSG FHALIASGTT PKLLASEGHA 
RYIGYGGMLM ESMVAIMAMV AAAVIEPGVY FAMNSPPAIV GADAASVAAA VSGWGFAITP 
EALESVARDI GETTILARAG GAPTLAVGIA QILHQVLPGA TSMAFWYHFA ILFEALFILT 
AVDAGTRAGR FMLQDLLGNF VPVLRRTDSW GANVLATAGC VALWGYLLYQ GVVDPLGGIN 
TLWPLFGISN QMLAGIALML CSVVLIKMKR QNYVWVTLLP AVWLLICTTV ASLIKLFDPN 
PAVGFLALAS KYAAAMDTGQ VLAPARDIGQ MQNVIMNAYT NAGLSVLFLV VVFSILFYSL 
KVGRAAWIVE QRTDKETPFQ AIPGA