Gene Avin_40960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_40960 
Symbol 
ID7762981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4130882 
End bp4132546 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content67% 
IMG OID643806955 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_002801206 
Protein GI226946133 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.512675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAT ACGTCTACAC CATGCATCGG GTCAGCAAGG TCGTGCCCCC GAAGCGTGAA 
ATCCTCAAGG ACATCTCCCT GTCGTTCTTT CCCGGCGCCA AGATCGGCGT GCTCGGTCTG
AACGGCGCCG GCAAGTCGAC CCTGCTGCGG ATCATGGCCG GGGTCGACAC CGAGTTCGAC
GGCGAGGCCC GGCCGATGCC CGGCATCAAG GTCGGCTACC TGCCGCAGGA GCCACAGCTC
GATCCGCAGA AGAGCGTGCG CGACATCGTC GAGGAGGCGG TGGGCGAGAT CAAGCAGGCC
CAGGCCCGCC TGGACGAGGT CTATGCCGCC TACGCCGAAC CGGACGCCGA CTTCGACGCG
CTGGCCGCCG AGCAGGCCAG GCTGGAGGCC ATTCTCCAGG CCGCCGACGG CCACAATCTG
GAGCGCCAGT TGGAAGTCGC CGCCGACGCC CTGCGCCTGC CGCCGTGGGA CGCCAGGATC
GAGCACCTCT CCGGCGGCGA GAAGCGCCGC GTGGCGCTGT GCCGCCTGCT GCTGTCGGCG
CCCGACATGC TGCTGCTGGA CGAGCCGACC AACCACCTGG ACGCCGACTC GGTGGCCTGG
CTGGAGCATT TCCTCCACGA CTTCCCCGGC ACCGTGGTGG CGATCACCCA CGACCGCTAC
TTCCTCGACA ACGTCGCCGG CTGGATTCTC GAACTGGACC GCGGCCACGG CATTCCCTTC
GAGGGCAACT ACTCGCAGTG GCTGGAATCC AAGGCCGCCC GCCTGGCCCA GGAGGCCAAG
GCCGAAGCCG CCCACGCCAA GGCCATGAAG GCCGAGCTGG AATGGGTGCG CCAGGGCGCC
AAGGCTCGCC AGGCCAAGTC CAAGGCGCGT CTTGCGCGTT TTGAGGAGAT GCAGTCCCAG
GAATTCCAGA AGCGCAGCGA GACCAACGAG ATCTACATTC CGGCCGGTCC GCGGCTGGGC
GACAAGGTCA TCGAGTTCCA CAACGTGCGC AAGGGCTACG GCGACCGCGT GCTGATCGAC
GACCTGTCCT TCGCGGTGCC CAAGGGCGCC ATCGTCGGCG TGATCGGCGG CAACGGCGCG
GGCAAGTCGA CCCTGTTCCG CATGATCCTC GGCAAGGAGA CGCCGGATGC CGGCGGCATC
GACATCGGCG AAACCGTGCA GGTCGCCAGC GTTGACCAGA GCCGCGACAA CCTGGACGGC
GGCAAGACCG TCTGGGAGCA GGTGTCCGAC GGCCTCGACC AGATCCGCAT CGGCAACTAC
GAGGTGCCCT CGCGCAGCTA CGTCGGCCGC TTCAACTTCA AGGGCGCCGA CCAGCAGAAG
TTCGTCAAGG ATCTCTCCGG CGGCGAGCGC GGCCGCCTGC ATCTGGCGCT GACCCTGAAG
CAGGGCGGCA ACCTGCTGCT GCTCGACGAG CCGTCCAACG ACCTCGACGT GGAAACCCTG
CGCGCGCTGG AGGAGGCGTT GCTGGACTTC CCCGGCTCGG CCATCGTGAT CTCCCACGAC
CGCTGGTTCC TCGACCGCAT CGCCACCCAC ATCCTCTCCT ACGAGGACGA CGGCAGCGTG
GTGTTCTTCG AGGGTAACTA CACCGAGTAC GAGGCCGACC GCAAGAAGCG CCTCGGCGAA
GCCGCCGCCC AGCCGCACCG GGTGCGTTAC AAGAAGCTGG CGTAA
 
Protein sequence
MAQYVYTMHR VSKVVPPKRE ILKDISLSFF PGAKIGVLGL NGAGKSTLLR IMAGVDTEFD 
GEARPMPGIK VGYLPQEPQL DPQKSVRDIV EEAVGEIKQA QARLDEVYAA YAEPDADFDA
LAAEQARLEA ILQAADGHNL ERQLEVAADA LRLPPWDARI EHLSGGEKRR VALCRLLLSA
PDMLLLDEPT NHLDADSVAW LEHFLHDFPG TVVAITHDRY FLDNVAGWIL ELDRGHGIPF
EGNYSQWLES KAARLAQEAK AEAAHAKAMK AELEWVRQGA KARQAKSKAR LARFEEMQSQ
EFQKRSETNE IYIPAGPRLG DKVIEFHNVR KGYGDRVLID DLSFAVPKGA IVGVIGGNGA
GKSTLFRMIL GKETPDAGGI DIGETVQVAS VDQSRDNLDG GKTVWEQVSD GLDQIRIGNY
EVPSRSYVGR FNFKGADQQK FVKDLSGGER GRLHLALTLK QGGNLLLLDE PSNDLDVETL
RALEEALLDF PGSAIVISHD RWFLDRIATH ILSYEDDGSV VFFEGNYTEY EADRKKRLGE
AAAQPHRVRY KKLA