| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_40790 |
|---|
| Symbol | rplU |
|---|
| ID | 7762964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4116453 |
|---|
| End bp | 4116764 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643806938 |
|---|
| Product | 50S ribosomal protein L21 |
|---|
| Protein accession | YP_002801189 |
|---|
| Protein GI | 226946116 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.200722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCAG TAATTGTGAC CGGCGGCAAG CAATACAAGG TTGCCGAAGG CGAATTCCTC
AAGATCGAGA AGCTCGAAGT GGGCACTGGC GAATCCGTCA CTTTCGACCG CGTGCTGCTG
GTCGGCAACG GTGACGACGT GAAGATCGGT GCCCCCGTGG TCGATGGCGC CAAGGTGACC
GCCGAGGTCG TGGGCCAGGG CCGTCACGAC AAGGTGAGCA TCATCAAGTT CCGCCGCCGC
AAGCACCACA TGAAGCACCA GGGCCACCGT CAGTGGTTCA CCGAAGTCAA AATCACCGGT
ATCCAGGCCT GA
|
|---|
| Protein sequence | MYAVIVTGGK QYKVAEGEFL KIEKLEVGTG ESVTFDRVLL VGNGDDVKIG APVVDGAKVT
AEVVGQGRHD KVSIIKFRRR KHHMKHQGHR QWFTEVKITG IQA
|
|---|
| |