| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_40780 |
|---|
| Symbol | rpmA |
|---|
| ID | 7762963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4116162 |
|---|
| End bp | 4116419 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643806937 |
|---|
| Product | 50S ribosomal protein L27 |
|---|
| Protein accession | YP_002801188 |
|---|
| Protein GI | 226946115 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0211] Ribosomal protein L27 |
|---|
| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACACA AAAAAGCTGG CGGTTCTACC CGCAACGGTC GCGACTCGGA AAGTAAACGC
CTTGGCGTGA AGATCTTCGG CGGCCAGGCC ATCAGGGCCG GCAACATCAT CGTGCGTCAG
CGCGGCACCC AGTTCCATCC CGGCTTCGGT GTGGGTATCG GCAAGGATCA CACCCTGTTC
GCGAAGGTGG AGGGCGTGGT CAAGTTCGAA GTGAAAGGTG CCTTCGGTCG TCGCTACGTG
AGCGTCGTAC CCGCCTGA
|
|---|
| Protein sequence | MAHKKAGGST RNGRDSESKR LGVKIFGGQA IRAGNIIVRQ RGTQFHPGFG VGIGKDHTLF
AKVEGVVKFE VKGAFGRRYV SVVPA
|
|---|
| |