Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_40480 |
Symbol | tgt |
ID | 7762934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4097999 |
End bp | 4099114 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643806907 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_002801159 |
Protein GI | 226946086 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTCG AGTTGCTGGC CACCGACGGC AAGGCCCGCC GCGGCCGTCT GACCTTTCCC CGCGGAGTGG TCGAGACTCC GGCGTTCATG CCGGTGGGTA CCTATGGCAC GGTGAAGGGC ATGCTGCCGC GCGACATCGA GGCGATCGGG GCACAGATCA TCCTCGGCAA TACTTTCCAT CTCTGGCTGC GGCCGGGGAC CGAGGTGATC CGCCGGCATG GCGATCTGCA CGACTTCATG CAGTGGCATG GACCGATCCT CACCGACTCG GGTGGTTTTC AGGTGTTCAG CCTGGGGGCG CTGCGCAAGA TCAGGGAGGA GGGGGTGTAT TTCGCCTCGC CGGTGGATGG CGCCAAGGTC TTCATGGGGC CCGAGGAGTC GATGCGGGTA CAGCGCGATC TCGGCTCGGA CGTCGTGATG ATCTTCGACG AATGCACGCC CTATCCGGCC GACGAGGAGG TGGCGCGGCG CTCCATGGAG CTGTCGCTGC GCTGGGCCGG GCGCTCGAAG ATCGCCCACG AGGGCAATCC GGCGGCGCTG TTCGGCATCG TCCAGGGCGG CATGCACGAG GATCTGCGCT TGCGTTCGCT GGATGGGCTG GAGGAGATCG GCTTCGACGG CCTGGCCATC GGCGGCCTGT CGGTCGGCGA GCCGAAGGAG GAGATGATCC GCGTGCTGGA CTTCCTGCCG CCGCGGCTGC CGGCGGACAA GCCGCGTTAC CTGATGGGCG TGGGCAAGCC GGAGGATCTG GTCGAGGGCG TACGCCGCGG CATCGACATG TTCGACTGCG TGATGCCGAC CCGCAACGCG CGCAACGGCC ATCTGTTCGT CGACAGTGGG GTGCTGAAGA TCCGCAATGC AGTGCATCGG CACGACGAGT CGCCGCTGGA CCCGGCCTGC GATTGTCACA CCTGCAAACA TTTCTCCCGC GCCTATCTGC ATCATTTGGA CAAATGCGGC GAAATGCTGG GCAGCATGTT GAATACAATC CACAACTTGC GGCATTACCA GCGTCTGATG ACTGGTTTGC GCGAGGCTAT CCAACAGGGT AAATTGGCCG CCTTTGTCGA TACCTTCTAC GCGCGGCGCG GTCTGCCGGT GCCGCCGCTG ACCTGA
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Protein sequence | MTFELLATDG KARRGRLTFP RGVVETPAFM PVGTYGTVKG MLPRDIEAIG AQIILGNTFH LWLRPGTEVI RRHGDLHDFM QWHGPILTDS GGFQVFSLGA LRKIREEGVY FASPVDGAKV FMGPEESMRV QRDLGSDVVM IFDECTPYPA DEEVARRSME LSLRWAGRSK IAHEGNPAAL FGIVQGGMHE DLRLRSLDGL EEIGFDGLAI GGLSVGEPKE EMIRVLDFLP PRLPADKPRY LMGVGKPEDL VEGVRRGIDM FDCVMPTRNA RNGHLFVDSG VLKIRNAVHR HDESPLDPAC DCHTCKHFSR AYLHHLDKCG EMLGSMLNTI HNLRHYQRLM TGLREAIQQG KLAAFVDTFY ARRGLPVPPL T
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