| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_40430 |
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| Symbol | trmH |
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| ID | 7762929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4092935 |
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| End bp | 4093711 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643806902 |
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| Product | RNA methyltransferase TrmH, group 1 |
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| Protein accession | YP_002801154 |
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| Protein GI | 226946081 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.573027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGCTGC AGAGCATTCG TGTTGTCCTG GTGAATACCA GTCACCCCGG CAATATCGGA
GGGGCGGCCC GCGCCATGCG GAACATGGGG CTGAGCCGTC TCTATCTGGT CGCTCCCGAA
GACTTTCCGA GCAGCGAGGC GGTTGCCCGG GCCTCCGGCG CCACCGACAT CCTGGACAAT
GCGCAGGTGG TCGCCACTCT GGAAGAGGCG CTGGTCGGTT GCACGCTGGC GCTCGGCACC
AGCGCCCGCG ACCGGCGCAT TCCCTGGCCG TTGCTGGACC CGCGCGAATG CGCCGCGACC
TGTCTGGAGC AGGTCGGTCA GGGCGCCGAG GTGGCGCTGG TGTTCGGTCG CGAATACGCC
GGGCTGACCA ACGAAGAACT GCAGCGCTGC CAGTTCCATG TGCACATTCC CTCGGATCCT
TCGTTCAGCT CTCTGAATCT GGCGGCGGCG GTGCAGGTGC TCGTCTATGA GGTGCGCATG
GCCTGGCTGG CGGCCGAAGG GGTGCCGAGC AAGCAGGAAA AGCTGGAAAC CACGGCGATG
CTCAATTCCC AGCCGGCCAC CATGGACGAA CTGGAGCTGT TCTACGGGCA CCTGGAAAGC
ACCCTGGTGG AGATCGGCTT CCTCGATCCG GAAAAGCCGC GCCACCTGAT GTCGCGCCTG
CGCCGGCTGT ATGGCCGCGG CGGGATCAGC AAGCTGGAAA TGAATATCCT GCGTGGCATC
CTGACGGAAA CCCAGAAGGC GGCCCGCGGC GAGGCCCATA CGCGGAGAAA GCGGTGA
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| Protein sequence | MLLQSIRVVL VNTSHPGNIG GAARAMRNMG LSRLYLVAPE DFPSSEAVAR ASGATDILDN
AQVVATLEEA LVGCTLALGT SARDRRIPWP LLDPRECAAT CLEQVGQGAE VALVFGREYA
GLTNEELQRC QFHVHIPSDP SFSSLNLAAA VQVLVYEVRM AWLAAEGVPS KQEKLETTAM
LNSQPATMDE LELFYGHLES TLVEIGFLDP EKPRHLMSRL RRLYGRGGIS KLEMNILRGI
LTETQKAARG EAHTRRKR
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