Gene Avin_40410 details

Gene Information

• Locus tag: Avin_40410
• Symbol: iscR
• ID: 7762927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 4091534
• End bp: 4092028
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643806900
• Product: Iron-sulphur cluster assembly transcription factor IscR
• Protein accession: YP_002801152
• Protein GI: 226946079
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator); [TIGR02010] iron-sulfur cluster assembly transcription factor IscR

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACTGA CAACCAAAGG CCGGTATGCC GTTACGGCCA TGCTCGATCT GGCATTGCAT 
GCCCAGAACG GCCCCGTTTC CCTCGCCGAC ATCTCCGAGC GCCAGGGCAT TTCCCTTTCC 
TACCTGGAGC AGTTGTTCGC CAAGCTGCGG CGCAACAGCC TGGTGACCAG CGTTCGCGGT 
CCCGGCGGTG GTTACCAGCT CTCCCGCAGT ATGGCCGCCA TCCAGGTAGC CGAAGTGATC 
GATGCGGTCA ACGAATCGGT GGACGTGACG CGCTGCCAGG GCGATCGCGG CTGCCGTTCG 
GGAGAGGTCT GCCTGACCCA CTACCTCTGG TGCGACCTCA GCCACCAGAT CCACGAATTC 
CTCAGCGGCA TCAGCCTGGC CGACCTGGTC GCCCGCAGCG ACGTCCAGGA TCTCGTCCGC 
TTGCAGGACC GGCGCCAGGG GGGCGGTTGT CCGCTGCCGT ATGCCGGAAA GATCGAAGCG 
TCCGCCATCG AATGA 

 

Protein sequence

MRLTTKGRYA VTAMLDLALH AQNGPVSLAD ISERQGISLS YLEQLFAKLR RNSLVTSVRG 
PGGGYQLSRS MAAIQVAEVI DAVNESVDVT RCQGDRGCRS GEVCLTHYLW CDLSHQIHEF 
LSGISLADLV ARSDVQDLVR LQDRRQGGGC PLPYAGKIEA SAIE