| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_40390 |
|---|
| Symbol | iscU |
|---|
| ID | 7762925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4089860 |
|---|
| End bp | 4090246 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643806898 |
|---|
| Product | scaffold protein |
|---|
| Protein accession | YP_002801150 |
|---|
| Protein GI | 226946077 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.960049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACA GTGACAAGGT CATCGACCAC TACGAAAACC CGCGCAACGT CGGCAAGCTC
GACGCGCAGG ACCCCGACGT CGGCACCGGC ATGGTGGGCG CCCCCGCCTG CGGCGACGTG
ATGCGCCTGC AGATCAAGGT CAACGAGCAG GGCATCATCG AGGACGCCAA GTTCAAGACC
TACGGCTGCG GTTCGGCCAT CGCCTCCAGT TCCCTGGCCA CCGAGTGGAT GAAAGGCAGG
ACCCTGGAAG AAGCCGAAAC CATCAAGAAC ACCCAGATCG CCGAGGAACT GGCTTTGCCG
CCGGTCAAGA TCCACTGCTC GGTCCTGGCG GAGGATGCCA TCAAGGCCGC CGTGCGCGAT
TACAAGCACA AGAAAGGCCT GGTTTGA
|
|---|
| Protein sequence | MAYSDKVIDH YENPRNVGKL DAQDPDVGTG MVGAPACGDV MRLQIKVNEQ GIIEDAKFKT
YGCGSAIASS SLATEWMKGR TLEEAETIKN TQIAEELALP PVKIHCSVLA EDAIKAAVRD
YKHKKGLV
|
|---|
| |