| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_40310 |
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| Symbol | pilF |
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| ID | 7762917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4084048 |
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| End bp | 4084806 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643806890 |
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| Product | type IV pilus biogenesis protein PilF |
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| Protein accession | YP_002801142 |
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| Protein GI | 226946069 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCGC GCGCTGCGCT GCTGCTGTTT TCCGCCACGC TGCTGGCCGG TTGCGTCTCG
ACCGGAGCGG TCGACCCCAT GCGGACCGAG CAGGGGCGCA AGGAGGCTCG CGAGGCGTAT
ATCCAGCTCG GCCTCGGTTA TCTCAAGCAG GGACGGACCG ACCGTGCCAA GGTGCCGCTG
GGCAAGGCCC TGGAGCTGGA CCCGTCCGAT GCCGACGCCC ACGCCGCCCT GGCCCTGGTG
TTCCAGACCG AACTCGAGCC CGACCTGGCC GACCGGCACT ATCGCAAGGC GCTCGCCGAG
CGTCCCGGCG ATGCGCGTAT CCTGAACAAC TACGGCAGCT TCCTGTTCGA GCAGCGTCGC
TACCAGGATG CCTACGAGCG TTTCCAGCAG GCCGCGGCCG ATACCCTGTA CCCCGAGCGC
GCGCGGGTCT ACCTCAACCT CGGGCTGGCC GCTATCGGGC TCGGCCGGCA GGATCTCGCC
AAGGCCCATC TGGAAAAATC CCTGCGGATC AACTCCCAGC AGCCGCTGAC GCTGCTGGAG
ATGGCCACAC TGAATTTCGA GACGCGCGAC TACGTGGCGG CGCGTTCCTA TTACTCCAGT
TTCAGCCGCA TGGGCGAGCA GAGCGCCCGC AGTCTGTTGC TGGGGACCCG CCTGGCGAAG
GTCTTCGATG ACCGCGACCA GGCTGCCACC TTCGGCCTGC AACTGAAGCG TCTTTACCCG
GGCACGCCGG AATATCAGCA ATATCTGTCG GAGCAATGA
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| Protein sequence | MTPRAALLLF SATLLAGCVS TGAVDPMRTE QGRKEAREAY IQLGLGYLKQ GRTDRAKVPL
GKALELDPSD ADAHAALALV FQTELEPDLA DRHYRKALAE RPGDARILNN YGSFLFEQRR
YQDAYERFQQ AAADTLYPER ARVYLNLGLA AIGLGRQDLA KAHLEKSLRI NSQQPLTLLE
MATLNFETRD YVAARSYYSS FSRMGEQSAR SLLLGTRLAK VFDDRDQAAT FGLQLKRLYP
GTPEYQQYLS EQ
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