Gene Avin_40300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_40300 
Symbol 
ID7762916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4083023 
End bp4084051 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content71% 
IMG OID643806889 
Producthypothetical protein 
Protein accessionYP_002801141 
Protein GI226946068 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACG CGTCGCAAAC CGAGAGCACG GCCGCGGCCT CCGTCAACCC GGGCGAGATC 
CTGCGCAAGG GCCGCGAGGC CAACGACTGG TCGCTGGCCC AGGTGGCCGG CCATCTGCAT
CTCCCCACCC GCACCCTGGC CCTGCTGGAG GCCGGCGAGT TCGAGCGGCT GCCGGGACAT
ACCTTCGCGC GTGGCTACGT GCGCTCCTAC GCCAAGCTGC TGGGAATGGA TCAGGCCCGC
CTGGTCGAGG CCTTCGACCG CTACACGGGC ACCGACGCCA AGGGCAGCGA AGTGCACAGC
CTGGGGAATA TCGAGCAGCC GGTGCGTCTT TCCCAGGGCA TCCTGCGCCT GGTCGGTCTC
GTCCTGATCC TTCTGCTGGT CGGTTCCGGC CTGTTCTGGT GGCAGGAGCG TTCCGCGTAC
CAAGGGGTCC GGAACGCGCT CAACCTGGCC CATGTCGAAG TCGACAGCGC CGATGGCACC
ACCCAGATCC ATCCGCTCGA CGAGCCCGAG GATCAGGCCG TGGCCCAGGC GCTCCAGCCC
GCCGAGCAGC AATCCCGGCC GGCTCCGCTG ACCGGCGCCG CCGTCGCTCC GAACGGCCCG
CCGGCGGCCG GAACCACGCC ACCGTCTCCG GCGCCGCTCG CACGCGGTAC GGACAGACCG
CTGGTCGAGT CGGCGCCCGC GCCCGTGGCA CCGGCCACTT CCGCCCCTGC CGTCGCCTCC
GCTCCGGAGG CCGCCGTTCC GCCGGAAGCC GCTCCCGCTT CGCCGCCGGT CGAGCCGGCC
GCCGGCGAAG GACTGCTGAA CATCCGCTTC ACGGCCGATT GCTGGGCGCA GGTCATCGAT
GCGCGCGGCA AGGTGCTGCT GCGCGGCCTG AAGCGTGCCG GCGATACGCT CGAACTGCGC
GGTCAGAAGC CGCTGGACGT GCGCCTCGGC TTCGCCCACG GCGCCGAAGT CAGCTTCGAT
GGCCAGCCGG TCGATCTGGC CCCCCACACC GCGCGTGGTG CGACCGCCCG CCTGAAACTT
GGGAATTAA
 
Protein sequence
MMNASQTEST AAASVNPGEI LRKGREANDW SLAQVAGHLH LPTRTLALLE AGEFERLPGH 
TFARGYVRSY AKLLGMDQAR LVEAFDRYTG TDAKGSEVHS LGNIEQPVRL SQGILRLVGL
VLILLLVGSG LFWWQERSAY QGVRNALNLA HVEVDSADGT TQIHPLDEPE DQAVAQALQP
AEQQSRPAPL TGAAVAPNGP PAAGTTPPSP APLARGTDRP LVESAPAPVA PATSAPAVAS
APEAAVPPEA APASPPVEPA AGEGLLNIRF TADCWAQVID ARGKVLLRGL KRAGDTLELR
GQKPLDVRLG FAHGAEVSFD GQPVDLAPHT ARGATARLKL GN