| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_40290 |
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| Symbol | ispG |
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| ID | 7762915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4081905 |
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| End bp | 4083017 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643806888 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_002801140 |
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| Protein GI | 226946067 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.295063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGCG AATCCCCCAT CCAGCGCCGC CCGTCGCGCA AGATCTGGGT CGGCCCGGTG
GCGGTCGGCG GCGATGCACC GATCTCGGTG CAAAGCATGA CCAACACCGA CACCCACGAT
GTCGAGGCCA CCGTGGCGCA GATCCGCCGC CTGGAGGCGG CCGGCGCCGA CATCGTCCGC
GTCTCGGTGC CGGACATGGA TGCCGCCGAG GCCTTCGGCC GGATCAAGCA GCAGGTACAG
CTGCCGCTGG TCGCCGACAT CCACTTCGAC TACCAGATCG CCCTGCGCGT GGCCGAGCTG
GGTGTCGACT GCCTGCGCAT CAATCCGGGC AACATCGGCC GCGAGGACCG GGTCCGCGCC
GTGGTGGATG CCGCGCGCGA CCGGGGTATC CCGATCCGTA TCGGTGTCAA CGCCGGCTCC
CTGGAGAAGG ACCTGCAGAA GAAGTACGGC GAGCCGACCC CGCAGGCGCT GGTGGAGTCC
GCCCTGCGTC ACGTCGAGCA CCTCGACCGC CTGGATTTCC AGAACTTCAA GGTCAGCGTC
AAAGCGTCCG ACGTGTTCAT GGCGGTGGCC GCCTATCGCC TGCTGGCCGG GCAGATCGAG
CAGCCGCTGC ACCTGGGCAT CACCGAGGCC GGCGGGCTGC GCTCCGGCAC CGTGAAGTCC
GCGGTGGGCC TCGGCATGCT GCTCGCCGAG GGCATCGGCG ACACCATCCG CGTCTCGCTG
GCCGCCGATC CGGTGGAGGA GATCAAGGTC GGCTTCGACA TCCTCAAGTC GCTGCACCTG
CGCTCGCGCG GCATCAATTT CATCGCCTGC CCGAGCTGTT CGCGGCAGAA CTTCGACGTG
GTGAAGACCA TGAACGAGCT GGAAACCCGC CTCGAGGACC TGCTGGTGCC GCTCGACGTG
GCGGTGATCG GCTGCGTGGT GAACGGCCCG GGCGAGGCCA AGGAGGCGCA CGTCGGCCTG
ACCGGCGGCA CCCCGAACAA CCTGGTCTAC ATCGACGGCA AGCCGGCGCA GAAGCTGGGC
AACGAGAATC TGGTGGACGA GCTGGAGCGG CTGATCCGCC GCAAGGCCGC GGAAAAGGCC
GCGGCCGATG CCAGCCTGAT CGTCCGCAGC TAA
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| Protein sequence | MHSESPIQRR PSRKIWVGPV AVGGDAPISV QSMTNTDTHD VEATVAQIRR LEAAGADIVR
VSVPDMDAAE AFGRIKQQVQ LPLVADIHFD YQIALRVAEL GVDCLRINPG NIGREDRVRA
VVDAARDRGI PIRIGVNAGS LEKDLQKKYG EPTPQALVES ALRHVEHLDR LDFQNFKVSV
KASDVFMAVA AYRLLAGQIE QPLHLGITEA GGLRSGTVKS AVGLGMLLAE GIGDTIRVSL
AADPVEEIKV GFDILKSLHL RSRGINFIAC PSCSRQNFDV VKTMNELETR LEDLLVPLDV
AVIGCVVNGP GEAKEAHVGL TGGTPNNLVY IDGKPAQKLG NENLVDELER LIRRKAAEKA
AADASLIVRS
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