| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_40120 |
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| Symbol | |
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| ID | 7762898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 4066194 |
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| End bp | 4067867 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643806871 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_002801123 |
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| Protein GI | 226946050 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.397785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGC TCAAAGATCC GTCGCAGAAA TACCGCCCCT TCGCGCCGAT CGCCCTGCGC
GACCGCACCT GGCCGGACCG GGTGATCGAC AAGGCGCCGC TCTGGCTGAG TACCGATTTG
CGCGACGGCA ACCAGTCGCT GATCGAGCCG ATGGATGCCG CGAAGAAGAT GCGCTTCTTC
AAGACCCTGG TGCAGGTCGG CCTGAAAGAG ATCGAGGTGG GCTTCCCGTC CGCCTCGCAG
ACCGATTTCG ACTTCGTCCG CGAACTGATC GAGGGCGGCC ACATCCCCGA CGACGTAACC
ATCCAGGTGC TGACCCAGGC CCGCGACGAC CTCATCGAGC GGACCTTCGA ATCGCTGAAG
GGTGCGAAGA AGGCCATCGT CCACTACTAC AACGCCTGCG CGCCGAGCTT CCGGCGCATC
GTGTTCGACC AGGACAAGGA AGGCGTCAAG CGGATCGCCG TCGCCGCCGG CCGGACCATC
AAGCGCCTGG CCGCCGCCGC GCCGGAAACC CGGTGGGGCT TCGAGTATTC CCCCGAGGTG
TTCAGCTCCA CCGAGAGCGA TTTCGCCGTC GAGGTGTGCA ACGCGGTGGT CGAGGTGTTC
CAGCCGACCC CGGCCAACCG CCTGATCCTC AACCTGCCGG CCACCATCGA ATGCGCCACG
CCGAACCACT ACGCCGACCA GATCGAGTGG TTCTGCCGGC ATGTCGACAG GCGCGACAGC
GTCATCGTCA GTCTGCACAC CCACAACGAC CGCGGCACCG GCGTGGCCGC CAGCGAGCTG
GGCCTGATGG CCGGCGCCGA CCGCGTCGAG GGCTGCCTGT TCGGCAACGG CGAGCGTACC
GGCAACGTCG ACCTGGTGAC CCTGGCGCTG AACCTCTACA CCCAGGGCGT CGACCCCGGG
CTGGACTTCT CCGACATCGA CGCGGTGCGC AAGGTGGTCG AGGAATGCAA CCAGTTGCCG
GTACACCCGC GCCATCCCTA CGTCGGCGAC CTGGTGCACA CCGCCTTCTC CGGCTCGCAC
CAGGACGCGA TCCGCAAGGG CTTCGCCCAG CAGGACCCGG AGGGCGTCTG GGAGGTGCCC
TATCTGCCGA TCGACCCGGC CGACATCGGC CGCAGCTACG AGGCGGTGAT CCGCGTCAAC
AGCCAGTCGG GCAAGGGCGG CATCGCCTAC CTGCTCGAAC AGGAGTACGG CATCAGCCTG
CCGCGGCGCA TGCAGATCGA GTTCAGCCAG GTGGTGCAGA AGGAGACCGA TCGCCTCGGC
CTGGAGATGA GCGCCGCGCA GATCCACGCG CTGCTCGAAG CCGAGTACCT GCGCGCCGAG
ACGCCCTACG CCTTGAAGGG CCATCGCCTG CAGGAGGAGA ACGGTACCTG CGCGCTGGAC
GTGGAAGTCT TCGACAAGGG CGAGAGCCGC CATTGGCGCG GCATCGGCAA GGGCCCGCTG
GAGGCGCTGG TCGCCTGCCT GCCGGTCCGC GTGGAGATCA TGGACTACCA CGAGCACGCC
ATCGGCGCCG GCAGCCATGC CAGGGCCGCG GCCTACATCG AGCTGCGCCT CGACGGCCAG
CGTTCGCTGC ACGGCCTGGG CATCGACGAG AACCTGACCA CGGCGAGCAT CCGCGCCCTG
TTCAGTGCCC TCAACCGCGC CCTCGGCCAG CAGGCGTCGA TCCGCGCGGC CTGA
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| Protein sequence | MPMLKDPSQK YRPFAPIALR DRTWPDRVID KAPLWLSTDL RDGNQSLIEP MDAAKKMRFF
KTLVQVGLKE IEVGFPSASQ TDFDFVRELI EGGHIPDDVT IQVLTQARDD LIERTFESLK
GAKKAIVHYY NACAPSFRRI VFDQDKEGVK RIAVAAGRTI KRLAAAAPET RWGFEYSPEV
FSSTESDFAV EVCNAVVEVF QPTPANRLIL NLPATIECAT PNHYADQIEW FCRHVDRRDS
VIVSLHTHND RGTGVAASEL GLMAGADRVE GCLFGNGERT GNVDLVTLAL NLYTQGVDPG
LDFSDIDAVR KVVEECNQLP VHPRHPYVGD LVHTAFSGSH QDAIRKGFAQ QDPEGVWEVP
YLPIDPADIG RSYEAVIRVN SQSGKGGIAY LLEQEYGISL PRRMQIEFSQ VVQKETDRLG
LEMSAAQIHA LLEAEYLRAE TPYALKGHRL QEENGTCALD VEVFDKGESR HWRGIGKGPL
EALVACLPVR VEIMDYHEHA IGAGSHARAA AYIELRLDGQ RSLHGLGIDE NLTTASIRAL
FSALNRALGQ QASIRAA
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