| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_40050 |
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| Symbol | gcd |
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| ID | 7762892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4057368 |
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| End bp | 4059773 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643806865 |
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| Product | Quinoprotein glucose dehydrogenase |
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| Protein accession | YP_002801117 |
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| Protein GI | 226946044 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACGA CAAGGGCGGC GCAGCCGCTG CGCATCACGC TGACCGGGAT ACTGGCGCTG
CTGATGGGCG CCCTGTTGGC GCTCGGCGGC GCCTATCTGG CGGTCCTGGG CGGCTCCTGG
TACTACCTGC TCGCCGGCCT CGGGCTGCTG GCCGTGGGCA TCCTGATCCT GGCGAGACGG
CGGCTGGCGA TCTGGCTGTA TGCCGTGCTG CTGCTCGCCA CCCTGGCCTG GACGATTCAC
GAGGCCGGCT CCGACTGGTG GCGGCTGGCG GCGCGCATCG ACCTGTGGTG GGTGCTGGGG
CTCTGGCTGC TGCTGCCCTT CGTCAACCGC CATATCGGCG TCCCGGCGCG CTGGCGGGAC
GGCGCCAGCG GCCTGCTCGG CATCGCTCTG CTGCTCGGCG CACTGCTGGC CGGTTACGCG
CTGACCCGGG ACCATTCGCG CATCGCCGGC GAGTTCGGTG CCGAGCGCAT GGCCGGCGCA
AGCCCGGCGG GAGCGGCCGA CCGCTCGGCG AGCGAGTGGC CGGCATACGG CGGCTCGGCG
CGCGGCGACC GCTACTCGGC GGCCGACCTG ATCACCCCCG GAAACGTCGG ACGGCTGAAG
AAGGCCTGGG AATACCATAC CGGCGACTGG CCCCGCGAAG GCGACCCGGC CGAATTCACC
AACCAGGTCA CGCCGCTGAA GATCGGCGAC AGCCTGTTCA TCTGCACCCC CCACAGCATC
GCCATCGCCC TGGACGCGGA CAGCGGCGAG GAACTGTGGC GCTTCGATCC GAACATCAAC
CGCGAGGCCA AGTACTACCA GCACATGACC TGCCGCGGCC TGGCCTATCA CGATGCGGCG
GCCTACCCCG GCGCCGGCGG CGAGGCCGCC GCCGGCGTTC CCGCGCGCTG CAGCCGCAGG
CTGTTCCTGC CGACCAACGA CGCCACGCTG TACGCGCTGG ACCCCGGCGA CGGCAAGCCG
TGCGAGGACT TCGGCACGGG CGGCATGATC GACCTGAAGG TGGGCCTGGG CGACCAGGCC
CTGGGGGTGT ACCTGCCGAC CTCGCCGCCG GTGGTGACCG AGAAGCTGCT GATCGTCGGC
GGCTCGGTGA CCGACAACGG CTCGGTGGAC TCCCCCGGCG GGGTGATCCG CGCCTACGAC
GTGCGCAGCG GCGCGCTGGT GTGGAACTGG GACCCGGGCA ACCCGGAAGC CACCGAGCCC
CTGCCGGCGG GCGGGACCTA CGTGCGCAGC ACGCCGAACT CCTGGACCAT CGCCGTGGCC
GACGAAGGGT TGGGGCTGGT CTTCATCCCC ACCGGCAACC AGACCCCGGA CCAGTGGGGA
GCGCGGCGCT CGCCGCAGGC CGAGCGTTTC ACCGCGGCCC TGGTGGCGCT CGATCTGGCC
AGCGGCAAGG TGCGCTGGGA ATTCCAGGCC GTGCACCACG ACCTGTGGGA CCGCGACCTG
CCTTCGCAAC CGACCCAGGT CGATCTCGAC GGCCCGCAGG GCAAGGTGCC GGCGATCATC
CAGGCGACCA AGGGCGGCGA TCTGTTCGTG CTGGACCGGC GCACCGGCCA GCCCGTGGTG
CCAGTGCGCG AGCGGCCCGT GCCGCAGGGC GCGGTCACGG GCGATTTCAC CGCACCGACC
CAGCCGGCCT CCGATCTCAG CTACGCCCCG CAGGAGCCGC TGCGCGAGCG CGACATGTGG
GGCGCCACGC CGTTCGATCA ACTGCTGTGC CGCATCCGCT TCCGCCAGTT GCGCTACGAG
GGGGACTTCA CGCCGCCGAG CGAGCAGGGC TCGCTGATCT ACCCCGGCAA TGTCGGCACC
TTCAACTGGC CATCGCTGGC GGTCGATCCG CAGCGGCAAC TGCTGTTCGC CGCGCCCAAC
TACCTGGCCT TCGTCTCGCG GCTGGTCGAG CGCGGCGAGG TCGAGGCCGG GGAACGCCGC
GAAGGCGGCG GCGAACTCGG CCTGCAGCCC AATCTCGGTG CTCCCTACCT GGTGCACCTG
GGACCGTTCG TCTCCCCGCT GGGCCTGCCC TGCCAGTCGC CCCCCTGGGG CTACGTCACG
GCGGTGGATC TGCGCAGCAT GCAGCCGGTG TGGATGCACA AGAACGGCAC CAGCCGCGAC
AACGCGCCGT TCATCCCGTT CGCCGTGGGC GTGCCCGCGC TGGGCGGGCC CCTGGTCACC
GCCGGCGGCG TGGCCTTTCT CAGCGGCACG CTGGATTACT ACCTGCGCGC CTACGATCTG
CGCAACGGCG AGGAACTGTG GAAGGGGCGC CTGCCCGCGG GTGGCCAGGC GACGCCGATC
ACCTACCTGT CGGAAAAGAC CGGCAAGCAG TTCGTCGTGG TGATGGCCGG CGGGCACAGC
TCGTTCGGCA CCCGGATCGG CGACTCGCTG GTCGCCTGGA CACTGGAGGA CGAGACGGAG
CGCTGA
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| Protein sequence | MVTTRAAQPL RITLTGILAL LMGALLALGG AYLAVLGGSW YYLLAGLGLL AVGILILARR
RLAIWLYAVL LLATLAWTIH EAGSDWWRLA ARIDLWWVLG LWLLLPFVNR HIGVPARWRD
GASGLLGIAL LLGALLAGYA LTRDHSRIAG EFGAERMAGA SPAGAADRSA SEWPAYGGSA
RGDRYSAADL ITPGNVGRLK KAWEYHTGDW PREGDPAEFT NQVTPLKIGD SLFICTPHSI
AIALDADSGE ELWRFDPNIN REAKYYQHMT CRGLAYHDAA AYPGAGGEAA AGVPARCSRR
LFLPTNDATL YALDPGDGKP CEDFGTGGMI DLKVGLGDQA LGVYLPTSPP VVTEKLLIVG
GSVTDNGSVD SPGGVIRAYD VRSGALVWNW DPGNPEATEP LPAGGTYVRS TPNSWTIAVA
DEGLGLVFIP TGNQTPDQWG ARRSPQAERF TAALVALDLA SGKVRWEFQA VHHDLWDRDL
PSQPTQVDLD GPQGKVPAII QATKGGDLFV LDRRTGQPVV PVRERPVPQG AVTGDFTAPT
QPASDLSYAP QEPLRERDMW GATPFDQLLC RIRFRQLRYE GDFTPPSEQG SLIYPGNVGT
FNWPSLAVDP QRQLLFAAPN YLAFVSRLVE RGEVEAGERR EGGGELGLQP NLGAPYLVHL
GPFVSPLGLP CQSPPWGYVT AVDLRSMQPV WMHKNGTSRD NAPFIPFAVG VPALGGPLVT
AGGVAFLSGT LDYYLRAYDL RNGEELWKGR LPAGGQATPI TYLSEKTGKQ FVVVMAGGHS
SFGTRIGDSL VAWTLEDETE R
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