Gene Avin_39750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39750 
Symbol 
ID7762864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4026017 
End bp4026994 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content71% 
IMG OID643806837 
ProductD-isomer specific 2-hydroxyacid dehydrogenase 
Protein accessionYP_002801089 
Protein GI226946016 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0255551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATCG TCATCCCCGA CGATTACCAG GATGTCATCC GCAGCCTCGA CTGCTTCGCC 
CGGCTGCGCG ATTCCGGCCA CAGCGTCGAG CTATTCCACG ACGCCGAGAG CGACCCGCAA
CGCCTCGCCG AACGCTTCGC CAGCGCCGAC GCGCTGGTGC TGACCCGCGA ACGCACACGC
ATCGACGAAG CCCTGCTGGC CCGCCTGCCC AGGCTCAAGC TGATCAGCCA GACCGGCAAG
ATCGCCGCCC ATCTCGATCT CGACGCCTGC ACCCGCCGCG GCGTCGCCGT GGCCGAGGGG
CGCGGCTCGC CGATCGCCCC GGCGGAACTG GCCTGGACGC TGATCCTCAA CGCCCGCCGC
CGGCTGCTGC CGGCCATCGC CGCCTTCCGC GAGGGCCGCT GGCAGACCAA TATCGGCGAG
CGCCTGGCCG GGCTGACCCT GGGCATCTGG GGCTACGGCA AGATCGGCCA GCGCCTGGCC
CGCTACGCCC AGGCCTTCGA GATGCCGGTG CTGGTCTGGG GCAGCGAGGC CTCGCGCCAG
GCCGCCGTCG CCCACGGCCA CCGCGCCGCC GCCTCCCGTG AAGCCTTCTT CGCCGAAGCC
GACGTGCTCA CCCTCAACCT GCGCCTGTCG CCGTCCACCC GGCACATCGT CGGCTTCGAC
GACCTGGCGC GGATGAAGCC CGACGCCCTG CTGGTCAACG TCAGCCGCGC CGAACTGATC
GCCCCCGGCG CCCTGCTCCG CGCCCTGGAC GCCGGCCGCC CCGGATTCGC CGCTCTCGAC
GTGTTCGAGC AGGAGCCGAT CCTCGACCCC GCCCACCCGC TGCCGAACCA CCCGCGGGTG
CTCTGCACCC CGCACCTGGG TTACGTCGAG AAGCACGGCT ACGAGTTGTA TTTCGGCGAT
GCCTTCGACA ACCTGCTGGC CTTCTTCGCC GGCCAGCCGC TCAACCTGGC CAATCCGCAA
GTGCTGGCGG AACGCTGA
 
Protein sequence
MHIVIPDDYQ DVIRSLDCFA RLRDSGHSVE LFHDAESDPQ RLAERFASAD ALVLTRERTR 
IDEALLARLP RLKLISQTGK IAAHLDLDAC TRRGVAVAEG RGSPIAPAEL AWTLILNARR
RLLPAIAAFR EGRWQTNIGE RLAGLTLGIW GYGKIGQRLA RYAQAFEMPV LVWGSEASRQ
AAVAHGHRAA ASREAFFAEA DVLTLNLRLS PSTRHIVGFD DLARMKPDAL LVNVSRAELI
APGALLRALD AGRPGFAALD VFEQEPILDP AHPLPNHPRV LCTPHLGYVE KHGYELYFGD
AFDNLLAFFA GQPLNLANPQ VLAER