Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_39740 |
Symbol | |
ID | 7762863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4023982 |
End bp | 4025829 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643806836 |
Product | DNA helicase |
Protein accession | YP_002801088 |
Protein GI | 226946015 |
COG category | [R] General function prediction only |
COG ID | [COG3972] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0820371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAC TCATCCCGGC GCCTGGCGCC TGTCTTTCGC GCATGACGGC CGGGGAGCGG CAGGTCGCCC GCGTGTTGCT GGACGGCCTC GAGGACGATT GCCTGATCTG GTACGACCTT TTTCCCGGCG AAGGGCGCCA CTATCCCAAT TTCATCGTCC TGCACCCCGA GCGCGGTCTG CTGTTTCTCG AGGTGCGGGA CTGGCGGGCG GGCAGCCTCA AGCGGATGTC CCGTGCCACC TGTACGCTGG AGAGCGTCGA GGGCCGCCGC GAGGTGGCGC ATCCCCTGGA ACTGGGGCGG CAAGGCATGC AGCGGCTGCT GAAGGAGCTG CTGCGCGATC CGCGACTGTG CCGGGACGGG GAGGCGCGTC CGCCTTTTCC CTGCGGTTGG GGGCTGGTCC TCACCGGCAT CGCCCGTAGC CAGTTGGAGC GGGGCATGCC CGCCGGGATG CGCGAGCAGT TGCTGCCGGA ACGGCAGGTA CTCCATCGGG ACGAGTTGCA CGAACTGGAG CCCGGCGCCC TGCGCCGGCG CCTGGAGTCG ATGTGCGTGC CCGGCGGCTC CGGCCGGCTG ACGCGGACGC AGATCGATGC CATCCGCTGG CATCTGTTTC CCGAGCTGCG TATCGGCGAC GACGGTCTGC CACTGTCCGG GAGCGCTCCG CCGCCGGCGG GCGGCATGCG GGTCATGGAC CTGCGTCAGG AGTACATCGC CCGCAGCCTC GGCGAGGGGC AGCAGGTCGT CCGGGGGGGC GCCGGTTCCG GCAAGACGCT GATTCTCGGC TACCGTTGCC TGCATCTGGC CGCGACGCTG CGCCGGCCGA TCCAGGTGCT GTGCTTCAAC GCCGCCCTGG CGGCCAGGCT GCGCGGCTTC GTCGCCGCGC ACGGCATCGA CGAGCGGGTA CGGGTCGAGC ATTTCCACGA CTGGTGCGAG CGGCAGCTCG AAACCTGGCA GGTCGAGTTG CTGGAGGGCG AGGACGAGCA TTACTGGCGG GTCGCCGACT CGGTGATCGC CGGGGTGGAG CGCGGGCGGA TTCCCGGCGG CCAGTACGGC GCGCTGCTGA TCGACGAAGG GCACGACTTC GAGCCGGACT GGCTGCGCCT GCTCGCACGG ATGATCGACC CGGCCGAGGG TTCGCTGCTG CTGCTCTACG ACGAGGCCCA AGCTCTCCAT CGGCGGCGTT CGGCGCAGGG CTTCGATCTG GCCAGCGTGG GCTTCCGGGC GCCGGGCTTC CGGGAGCCGG GCGACCGGAC GCCGGGCAGC GGCGGCATGC TCCGCCGCAA TTACCGCAAC AGCCGGGAAA TCCTCGCCTT CGGCCATTGC CTGGCCGGTG GGCATCTGGC CGACGACGAG GGCGACATGC CGCCGGCAGC CGCCGCTCCG GGGCCGCGGC CGGCGTTGCG GCGTTTCCCG CGCCTGTCCG GGGAGACGGC CCATGCCGTC TGCTGCCTGC GCCAGTGGTA TGCCGAAGGG CTGGCCTGGG GCGACATGGC GCTGCTCTAT CCGCAGGGCG GTGCCGGCGA GGCCATGGTC GAGGCGCTGG TCGCGCTCGG CATTCCCCAT GCCTGGCTGG AAGACGACGA GGCCCGCCGC GGCTACCGCG CCGATGCGCA GCGGGTGTCG GTCATGCCCA TCCAGGCCGC GAAGGGGCTG GAGTTCGCCG CGGTGGTGTT GTTCGACGCT TCCTTCGTGG CGCCGGGCGA GGAGGCCGAC AGCTCGCTGC CCGAGCGGGT GCGGCTGCTG CACATCGGCA TCGGCCGGGC GCGGCAGCGA CTGCTGGTCA GTTTCCATCG CAACAACGCG CTCGCCCGGG CGCTGGGCGC GGACGAGCTG AGCCGCTACG CACATTGA
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Protein sequence | MAELIPAPGA CLSRMTAGER QVARVLLDGL EDDCLIWYDL FPGEGRHYPN FIVLHPERGL LFLEVRDWRA GSLKRMSRAT CTLESVEGRR EVAHPLELGR QGMQRLLKEL LRDPRLCRDG EARPPFPCGW GLVLTGIARS QLERGMPAGM REQLLPERQV LHRDELHELE PGALRRRLES MCVPGGSGRL TRTQIDAIRW HLFPELRIGD DGLPLSGSAP PPAGGMRVMD LRQEYIARSL GEGQQVVRGG AGSGKTLILG YRCLHLAATL RRPIQVLCFN AALAARLRGF VAAHGIDERV RVEHFHDWCE RQLETWQVEL LEGEDEHYWR VADSVIAGVE RGRIPGGQYG ALLIDEGHDF EPDWLRLLAR MIDPAEGSLL LLYDEAQALH RRRSAQGFDL ASVGFRAPGF REPGDRTPGS GGMLRRNYRN SREILAFGHC LAGGHLADDE GDMPPAAAAP GPRPALRRFP RLSGETAHAV CCLRQWYAEG LAWGDMALLY PQGGAGEAMV EALVALGIPH AWLEDDEARR GYRADAQRVS VMPIQAAKGL EFAAVVLFDA SFVAPGEEAD SSLPERVRLL HIGIGRARQR LLVSFHRNNA LARALGADEL SRYAH
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