| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_39390 |
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| Symbol | lysS |
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| ID | 7762828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3988146 |
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| End bp | 3989648 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643806802 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002801054 |
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| Protein GI | 226945981 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC AACCGCTGAA CCAGCATGCC CTCCACGAGG AAGAAAACAA GCTGATCGCC
CTGCGCAAGG AGAAACTCGC CGCCGAGCGC GCGAAAGGCA ATGCCTTCCC CAACGACTTC
CGCCGCGACA GCTACTGCGC CGACCTGCAG AAGCGCTATG CCGAGGCGGG CAAGGAGGAG
CTGGAAGCGG CCGCGATCCC GGTCAAAGTG GCCGGGCGCA TCATGCTCAA CCGCGGCGCC
TTCATGGTCA TCCAGGACAT GACCGGGCGC ATCCAGGTCT ACGTCGACCG CAAGGGCCTG
CCGGCCGAGA CGCTGGAGGC GGTCAAGCAC TGGGACCTGG GCGACATCAT CGCCGCCGAG
GGCACCCTGG CGCGCTCCGG CAAGGGCGAT CTCTACGTGC ACATGAGCAC GGTGCGCCTG
CTGACCAAGT CGCTGCGCCC GCTGCCGGAC AAGCATCATG GCCTGACCGA CACCGAGCAG
CGCTACCGCC AGCGTTACGT CGACCTGATG GTCAACGAGG AAACCCGCCA CACCTTCCGC
GTGCGTTCGC AGATCATCGC CCACATTCGC AGGTTCCTCG CCGAGCGCGA CTTCCTCGAG
GTGGAAACGC CGATGCTCCA GGTCATCCCC GGCGGCGCCG CGGCCAAGCC CTTCCAGACC
CACCACAACG CGCTGGACCT GCCGATGTTC CTGCGCATCG CACCCGAGCT CTACCTCAAG
CGCCTGGTGG TCGGCGGCTT CGAGCGGGTC TTCGAGATCA ACCGCAACTT CCGCAACGAA
GGCGTCTCGA CCCGCCACAA CCCCGAATTC ACCATGCTCG AGTTCTACCA GGCCTACGCC
GACTACGAGG ACAACATGGA CCTCACCGAG CAGTTGTTCC GCGAACTGGC GCAACTGGTG
CTGGGGACCA CCGACGTGCC CTACCAGGGT AAGGTGTTCC ACTTCGGCGA GCCCTTCGCC
CGCCTGTCGG TGTTCGACTC GATCCTCTAC TACAACCCGG AAGTCTCCGC CGCGGACCTG
CGCGACATCG AGAAATGCCG CGCCATCGCC AGGAAGGCCG GCGCCGACGT CAAGGGTTTC
GAGGGACTGG GCAAGCTGCA GACGATGATC TTCGAGGAGT TGGTCGAGCA CCGCCTGGAA
CAGCCGACCT TCATCACCCG CTATCCCTTC GAGGTTTCGC CGCTGGCGCG GCGCAGCGAC
GACGATCCGA GCGTCACCGA CCGCTTCGAG CTGTTCATCG GCGGCCGCGA GATCGCCAAC
GCCTACTCCG AGCTGAACGA CGCCGAGGAC CAGGCCGAGC GCTTCATGCA GCAGGTCCGG
GACAAGGATG CCGGCGATGA CGAGGCCATG CACTTCGACG CCGACTTCGT GCGCGCCCTG
GAATACGGCA TGCCGCCGAC CGCCGGCGAA GGCATCGGCA TCGACCGTCT GGTGATGCTG
CTGACCGATT CGCCGTCGAT CCGCGACGTG ATCCTTTTCC CGCACATGCG TCCGGAAGTC
TGA
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| Protein sequence | MSEQPLNQHA LHEEENKLIA LRKEKLAAER AKGNAFPNDF RRDSYCADLQ KRYAEAGKEE
LEAAAIPVKV AGRIMLNRGA FMVIQDMTGR IQVYVDRKGL PAETLEAVKH WDLGDIIAAE
GTLARSGKGD LYVHMSTVRL LTKSLRPLPD KHHGLTDTEQ RYRQRYVDLM VNEETRHTFR
VRSQIIAHIR RFLAERDFLE VETPMLQVIP GGAAAKPFQT HHNALDLPMF LRIAPELYLK
RLVVGGFERV FEINRNFRNE GVSTRHNPEF TMLEFYQAYA DYEDNMDLTE QLFRELAQLV
LGTTDVPYQG KVFHFGEPFA RLSVFDSILY YNPEVSAADL RDIEKCRAIA RKAGADVKGF
EGLGKLQTMI FEELVEHRLE QPTFITRYPF EVSPLARRSD DDPSVTDRFE LFIGGREIAN
AYSELNDAED QAERFMQQVR DKDAGDDEAM HFDADFVRAL EYGMPPTAGE GIGIDRLVML
LTDSPSIRDV ILFPHMRPEV
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