Gene Avin_39300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39300 
Symbolppc 
ID7762819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3979606 
End bp3982242 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content71% 
IMG OID643806793 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_002801045 
Protein GI226945972 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGAAA TCGACGCCCG CCTGCGCGAG GACGTCCGCC TGCTCGGCGA ACTGCTCGGC 
GAATATATCC ATGCCCAGTG CGGTGAGGTC TTCTTCGACA AGATCGAGCG CATCCGCCTG
GGGGCCAAGA CGGGACGCCT GGGGTCGGAG GAGGGCGCCG AGCAGTTGAC CCGTACCCTG
GGCGAGCTGC GGGAGGACGA GCTGCAGCCG GTGGCGCGGG CCTTCAACCA GTTCCTCAAC
CTGGCCAACA TCGCCGAGCA GTACCACGAG ATCCGCCGCC GCGCTCCCGA GGAGCCGCCG
CCCTTCGCGG TGCGCGCCCT GCCCGAACTG CTCGACCGGC TGTTGGCCGG CGGCCATGCC
GCAGACGCAT TGGCCCGCCA ACTCGGGCGC CTGGAGATCG ACCTGGTGCT CACCGCCCAC
CCCACCGAGG TGACGCGCCG TACCCTGATC CGCAAGTACG AGGCGATCGC CGCCGAACTG
GCCGTGCTGG ATCATGGCGA TCTGCTGCCG GCCGAGCGCG AGGCGGTGCA CGAGCGCCTG
CGCCGGTTGA TCGCCGAGGC CTGGCACACC GACGAGATCC GCCGCAGCCG GCCGACCCCG
GTGGACGAGG CCAAATGGGG CTTCTCGGTG ATCGAGCATT CCCTCTGGCA GGCCGTGCCG
GCCTTCCTGC GCGGCGTCGA CCGCGCGTTG CACGAGGCCA CCGGCCTGCA CCTGCCGCTG
GAGGCGGCGC CGATCCGCTT CTCCTCCTGG ATGGGCGGCG ATCGCGACGG CAACCCCAAT
GTCACCGCCG CGGTCACCCG CGAGGTGCTG CTGCTGGCGC GCTGGGCGGC TGCCGACCTC
CATCTGCGCG ACGTCGAGCA ACTGGCCGCC GAGTTGTCCA TGCAGGAGGC GAGCAGCGAG
CTGCGCGCCC GGACCGGCGA GGTCGACGAA CCCTACCGGG TTCTGCTCAA GCAACTGCGC
GAGCGGCTGT TCGCCACTCG CGACTGGGCC GCGGCGGCCC TGCACGGCGA GGCCGTGCGT
TCGCCGGCGG TGCTGCAGAA CAACCGCGAG CTCCTGCAGC CGCTGGAACT CTGCTACCGC
TCGCTGCATG CCTGCGGCAT GGGGCTGATC GCCGACGGTC CGCTGCTCGA CAGCCTGCGC
CGGGCGGCCA CCTTCGGCCT GTTCCTGGTG CGCCTGGACA TCCGCCAGGA TGCCGCCCGG
CATGCCGCGG CGCTCAGCGA GATCACCGAA TACCTGGGTC TCGGCCGCTA CGCCGACTGG
AACGAGGAAA CCCGTACCGC CTTTCTGATG CGCGAGCTGG ACAGCCGCCG GCCGCTGTTG
CCGGTGCATT TTCCCGCCTC CGCGGAAACC GCCGAGGTCC TCGCCACCTG CCGCGAGGTG
GCGCAGGCCC CGGCGGCGTC GCTGGGCTCC TACGTCATCT CCATGGCCGC GGCGCCCTCC
GACGTGCTGG CCGTGCAACT GCTGCTCAAG GAGTGCGGCC TGCAGCGGCC GATGCGTGTG
GTACCGCTGT TCGAAACCCT GACCGACCTG GACAACGCCG CGCCGACGGT GGAGCGGCTC
CTGCTGCTGC CGGGCTACCG CGCCCGCCTG CACGGTCCCC AGGAGGTGAT GATCGGCTAT
TCCGACTCGG CCAAGGACGG CGGCACCACG GCCGCCGCCT GGGCACAGTA CCGCGCCCAG
GAAGGCCTGG TGGAGGTCTG CCGGCGACAG GGCGTCGAAC TGCTGCTGTT CCATGGCCGC
GGCGGTACCG TCGGTCGTGG CGGCGGTCCG GCCCATGCGG CGATCCTCTC CCAGCCGCCG
GGCTCGGTGC CCGGACGCTT TCGCACCACC GAACAGGGCG AGATGATCCG CTTCAAGTTC
GGCCTGCCGG ACACCGCCGT GCAGAGCCTG AACCTCTATC TGTCCGCCGT CCTCGAGGCC
ACCCTGCTGC CGCCGCCGGC GCCGGAGCCG GCCTGGCGCG AACTGATGGA CCGCCTGGCC
GCCGAGGGGC TGGCCGCCTA TCGCAGCGTG GTGCGCGAGC ATCCGCAGTT CGTCGAATAT
TTCCGCCAGG CCACGCCCGA GCAGGAACTC GGCCGCCTGC CGCTGGGCAG TCGCCCGGCC
AAGCGGCGGG CCGGCGGGAT CGAGAGCCTG CGGGCGATTC CCTGGATCTT CGCCTGGACC
CAGACGCGCC TGATGCTGCC GGCCTGGCTG GGCTGGGAGA CGGCCCTGGG CAATGCCCTG
GCGCGCGGCG AGGGCGAACT GCTCAGGCGG ATGAGCCGGC ATTGGCCGTT CTTCGGCACG
CGCATCGACA TGCTGGAAAT GGTCCTGGCC AAATCGGATG CCGCCATCGC CCAACTGTAC
GACGAGCGGC TGGTGGAGCC GGGCCTGCTT CCCCTGGGGC AGCAACTGCG CGGCCTGTTG
TCGCAGGCCT GCGCCGCCGT CCTCGAATTG ACGGAGCAGG ATCGCCTGCT TGGCCACAAT
CCCGAGGTTC GTGCCGCCTT CAGCGTGCGC AATACTTACC TGGATCCTTT GCATCTGCTG
CAGGTCGAAC TGCTGGCCCG CTACCGTCTG CACCAGGAGC AGGCCTGCAG CCCTCTGGAG
CAGGCATTGC TGGTGAGCGT GGCGGGCATC GCCGCCGGTC TGCGCAACAC CGGCTGA
 
Protein sequence
MEEIDARLRE DVRLLGELLG EYIHAQCGEV FFDKIERIRL GAKTGRLGSE EGAEQLTRTL 
GELREDELQP VARAFNQFLN LANIAEQYHE IRRRAPEEPP PFAVRALPEL LDRLLAGGHA
ADALARQLGR LEIDLVLTAH PTEVTRRTLI RKYEAIAAEL AVLDHGDLLP AEREAVHERL
RRLIAEAWHT DEIRRSRPTP VDEAKWGFSV IEHSLWQAVP AFLRGVDRAL HEATGLHLPL
EAAPIRFSSW MGGDRDGNPN VTAAVTREVL LLARWAAADL HLRDVEQLAA ELSMQEASSE
LRARTGEVDE PYRVLLKQLR ERLFATRDWA AAALHGEAVR SPAVLQNNRE LLQPLELCYR
SLHACGMGLI ADGPLLDSLR RAATFGLFLV RLDIRQDAAR HAAALSEITE YLGLGRYADW
NEETRTAFLM RELDSRRPLL PVHFPASAET AEVLATCREV AQAPAASLGS YVISMAAAPS
DVLAVQLLLK ECGLQRPMRV VPLFETLTDL DNAAPTVERL LLLPGYRARL HGPQEVMIGY
SDSAKDGGTT AAAWAQYRAQ EGLVEVCRRQ GVELLLFHGR GGTVGRGGGP AHAAILSQPP
GSVPGRFRTT EQGEMIRFKF GLPDTAVQSL NLYLSAVLEA TLLPPPAPEP AWRELMDRLA
AEGLAAYRSV VREHPQFVEY FRQATPEQEL GRLPLGSRPA KRRAGGIESL RAIPWIFAWT
QTRLMLPAWL GWETALGNAL ARGEGELLRR MSRHWPFFGT RIDMLEMVLA KSDAAIAQLY
DERLVEPGLL PLGQQLRGLL SQACAAVLEL TEQDRLLGHN PEVRAAFSVR NTYLDPLHLL
QVELLARYRL HQEQACSPLE QALLVSVAGI AAGLRNTG