Gene Avin_39250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39250 
Symbol 
ID7762814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp3976343 
End bp3977011 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content71% 
IMG OID643806788 
Producthypothetical protein 
Protein accessionYP_002801040 
Protein GI226945967 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.926206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTGTGCG CGCTGCTGGC AGGGCTCGCC TGGGGCGGCT GGCAGGCCTG GCCGGCCGTG 
CCGCCCCGCT GGAATCCCTG GGCGCCGCTG GATGTGCGGG ATTCGCCGAA CCCGCTCACG 
CCCTTCAAGC AATGGCGCCT GCGGCACGAT CCGGCGCTCT GCGCCACGGC GCTGGCCAGT 
TCCGCACTGC GTTATACCGT CCTGGCCGAC AGCCGGCCGG CGCCCGATTG CCCGATCGAG 
AACAGCGTGC GTCTGCACGC CGCCGAAGTC GCTTTCAATG CCAGCTTCAC CGCCACCTGC 
CCGCTCGCCG TCGGCTATGC CCTGTTCGAG CGCCATGGCC TGCAGCCGGC GGCCCGGCGG 
GTGTTCGGCC AGCCGGTGGT GGGCATCGAG CACTATGGCA GCTTCGCCTG CCGCAATATC 
GCGCGCAGCG CCAGGCGCAG CCAGCACGCC AGCGCCAATG CCCTGGATAT CGCCGGTTTC 
CGCCTGGGTG ACGGCCGGCG CATCAGCGTG GCCCGCGACT GGGGCGGCGA CGACCAGGCG 
GCGCGCTTTC TGCGCCTGGT GCGCGATGCC GCTTGCCGTT CCTTCAACGT CACCCTGGGC 
CCGGATTACA ACGCTGCGCA CCGCGATCAC CTGCACGTCG ACATGGGGCC GGGCCGGCTC 
TGCCGTTAG
 
Protein sequence
MVCALLAGLA WGGWQAWPAV PPRWNPWAPL DVRDSPNPLT PFKQWRLRHD PALCATALAS 
SALRYTVLAD SRPAPDCPIE NSVRLHAAEV AFNASFTATC PLAVGYALFE RHGLQPAARR 
VFGQPVVGIE HYGSFACRNI ARSARRSQHA SANALDIAGF RLGDGRRISV ARDWGGDDQA 
ARFLRLVRDA ACRSFNVTLG PDYNAAHRDH LHVDMGPGRL CR