Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_39220 |
Symbol | |
ID | 7762811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3973523 |
End bp | 3974443 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643806785 |
Product | ABC transporter |
Protein accession | YP_002801037 |
Protein GI | 226945964 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0732588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAGA TAGAGAAGCT GACCAGGCGC TTCGCGCAGC GCACCGCGGT GGACGATCTG TCCTTCCGCG TCCAGCCGGG GGAGGTGCTG GGCTTTCTCG GCCCCAACGG CGCCGGCAAG TCCACCACCA TGAAAATGCT CACCGGCTTT CTCGCGCCGA CCTCCGGCAC CGCGCGCATC CTCGGTTTCG ACATCCGCCG CCAGACCCTC CAGGCCCAGC GGCTGATCGG CTATCTGCCG GAGGGCGCGC CCTGCTATGG GGACATGCGC GTGGCCGGCT TCCTCGGCTT CATCGCCGAG GTGCGCGGTT TCCGCGGCGC GGAGAAGCGG CGGCGGGTCG CCGCGGCGGT CGAGCGGCTG GAACTGGAGA AGGTGCTCGG GCAGAGCATC GATACCCTCT CCAAGGGCTT CAAGCGCCGG GTCGGCCTGG CCCAGGCGAT TCTCCACGAG CCGCCGGTGC TGATCCTCGA CGAGCCGACC GATGGCCTCG ATCCCAACCA GAAGCATCAG GTGCGCCGGT TGATCGGCGA TCTGGCCCGC GACCGCATCG TGATCATCTC CACCCATATC CTCGAGGAGG TGACGGCGGT GTGCAGCCGC GCGCTGATCA TCGCCGCCGG CAGGCTGGTG GCCGACGGCA CGCCGCTGGA GCTGGAAAGC CGCTCGCGCT ACCACCAGGC GGTGACCCTG GTCGGCGAGG GCCTGGAGCA GAATGCGCTG GCGGCGCTGC CGGGCGTCGC CGGAATCGAG AGCAATCCAC GCGAGGGCAG CCTCACCGTG CTGGCCAGGC CGGGGGAGGT GATCTTTCCC CAGGTCAATG CGCTGATCCA CCAGCGCGGC TGGCAGGTGC GCGAGCTGGA CGTGGAGCGC GGCCGCCTCG ACGAAGTGTT CCGCAGTCTG ACCCGAGGGG AGGCGGCATG A
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Protein sequence | MIEIEKLTRR FAQRTAVDDL SFRVQPGEVL GFLGPNGAGK STTMKMLTGF LAPTSGTARI LGFDIRRQTL QAQRLIGYLP EGAPCYGDMR VAGFLGFIAE VRGFRGAEKR RRVAAAVERL ELEKVLGQSI DTLSKGFKRR VGLAQAILHE PPVLILDEPT DGLDPNQKHQ VRRLIGDLAR DRIVIISTHI LEEVTAVCSR ALIIAAGRLV ADGTPLELES RSRYHQAVTL VGEGLEQNAL AALPGVAGIE SNPREGSLTV LARPGEVIFP QVNALIHQRG WQVRELDVER GRLDEVFRSL TRGEAA
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