| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_39150 |
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| Symbol | dapE |
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| ID | 7762804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 3967980 |
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| End bp | 3969170 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643806778 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002801030 |
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| Protein GI | 226945957 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.96869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCCT TTTCCCGCCG TTTCGGAGCC ATGATGACCG CCACCGCCCT CTCCCCCACC
CTGGCGCTCG CCTGCGAACT GATCGACCGG CCCTCGGTCA CGCCGCTGGA CGAGGGTTGC
CAGGCGCTGA TGATGGCCCG CCTGGGCGCC CTCGGCTTCG CCCTGGAACC GATGCGCATC
GGAGAGGTGG AGAATTTCTG GGCCCGTCGC GACGGCGGCA CGGGCGAGGG ACCGGTACTC
TGCTTCGCCG GCCATACCGA CGTGGTGCCG ACAGGTCCGC ACGAAGCTTG GCAGACCCCG
CCCTTCACCG CCACCCTCGA CGCCGACGGC ATGCTCCGCG GGCGCGGCGC GGCGGACATG
AAGGGCAGCC TGGCGGCCAT GCTGGTCGCG GTGGAACGCT TCGTCGCCGA CCATCCGCGC
CATCGCGGGG CGATCGCCTT CCTGATCACC AGCGACGAGG AAGGCCCGGC GCTGCACGGT
ACCCAGGCGG TGGTCGAGCG CCTGCGCGCG CGTGGCGAAC GCCTGGACTG GTGCATCGTC
GGCGAGCCGT CGAGCAGCGA GACGCTCGGC GACGTGGTGA AGAACGGCCG GCGCGGCTCG
CTCGGCGCGA CTCTGACGGT GCGCGGCAAG CAGGGCCACG TGGCCTATCC GCAACTGGCC
AGGAATCCCA TCCACCAGGC CGCGCCGGCG CTGGCCGAAC TGGCCGCCGA GCACTGGGAC
GACGGCAACG CCTTCTTCCC GCCGACCAGC TTCCAGATCT CCAACATCCA GGCCGGCACC
GGCGCCACCA ACGTGATCCC CGGCGAGCTG CAGATGTTGT TCAACTTCCG CTTCTCCACC
GAGTCCACGG TGGAGGGTCT GCAGCGGCGC GTCGCGGCGA TCCTCGACCG CCACGGCCTC
GACTGGCACA TCGACTGGGC GCTGTCCGGC CTGCCCTTCC TCACCGAACC GGGCGCACTG
CTGGACGCCG TGTCGGCCAG CATCCGCGCG GTGACCGGCC GGGACACCAC GCCCTCGACC
AGCGGCGGCA CCTCGGACGG CCGCTTCATC GCCACCCTGG GCACCCAGGT GGTCGAGGTC
GGTCCGCTCA ACGCCACCAT CCACCAGGTC GACGAATGCG TGCTGGCCAG CGACCTGGAG
CTGCTCACCG AAATCCACTA CCAGACCCTG GTGCGGCTGC TGGCATGCTG A
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| Protein sequence | MPSFSRRFGA MMTATALSPT LALACELIDR PSVTPLDEGC QALMMARLGA LGFALEPMRI
GEVENFWARR DGGTGEGPVL CFAGHTDVVP TGPHEAWQTP PFTATLDADG MLRGRGAADM
KGSLAAMLVA VERFVADHPR HRGAIAFLIT SDEEGPALHG TQAVVERLRA RGERLDWCIV
GEPSSSETLG DVVKNGRRGS LGATLTVRGK QGHVAYPQLA RNPIHQAAPA LAELAAEHWD
DGNAFFPPTS FQISNIQAGT GATNVIPGEL QMLFNFRFST ESTVEGLQRR VAAILDRHGL
DWHIDWALSG LPFLTEPGAL LDAVSASIRA VTGRDTTPST SGGTSDGRFI ATLGTQVVEV
GPLNATIHQV DECVLASDLE LLTEIHYQTL VRLLAC
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