| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38930 |
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| Symbol | dxr |
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| ID | 7762782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3940212 |
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| End bp | 3941399 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643806756 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_002801008 |
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| Protein GI | 226945935 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCCAC AAAGAATAAC GGTGCTGGGT GCCACCGGCT CGATCGGCCT GAGCACTCTG
GATGTGATCG CCCGCCACCC CGAACGTTAC CGGGCCTTCG CGCTGACGGG GTTCACCCGG
CTGGACGAGT TGCGGGCGCT CTGCCTGCGC TTTGCTCCCT GTTATGCCGT GGTGCCCGAG
GCGGCGGCGG CCTGCCGGCT CGAAGACGAG CTGCGCGCCG CCGGCTTGGA CACGCGGGTG
CTGTTCGGAA GCGAGGGACT GTGCGAGGTG GCGGCCCATC CCGAAGCGGA TGCGGTGATG
GCGGCGATCG TCGGAGCCGC CGGGCTGCGT CCCACGCTGG CGGCTGTGGA GGCGGGCAAG
AAGGTTCTGC TGGCCAACAA GGAGGCGCTG GTGATGTCCG GTGCCCTGTT CATGCAGGCG
GTGCGCCGCA GCGGTGCGCA GTTGCTGCCG ATCGATAGCG AGCACAACGC GATCTTCCAA
TGCCTGCCCG CCGCCTATGG GAACGGTCTG GCGACGGTCG GCGTGCGGCG CATCCTGCTG
ACCGCCTCCG GTGGGCCCTT CCGCGAGACT CCGGCGGCCG AATTGATCGA GGTGACGCCG
GCGCAGGCCT GCGCCCATCC CAACTGGTCG ATGGGGCGGA AGATCTCCGT GGATTCGGCC
AGCATGATGA ACAAGGGGCT GGAACTGATC GAGGCCTGCT GGCTGTTCGA TGCGCGTCCC
GCACAGGTCG AGGTGGTGGT CCACCCGCAG AGCGTGATTC ATTCCCTGGT CGATTACATC
GATGGCTCGG TGCTGGCGCA ACTGGGCAAT CCGGACATGC GTACGCCGAT CGCCCATGCG
CTGGCCTGGC CCGAGCGAAT CGATTCCGGG GTCGTTCCCC TGGATCTGTT CTCCATCGCC
CGCCTGGACT TCCAGGCTCC CGACCCTGCG CGCTTTCCCT GCCTGCGTCT GGCCCGGGAG
GCGGCCGAGG TCGGCGGCAG CGCGCCGGCC ATGCTCAATG CCGCCAACGA GGTGGCCGTG
GCGGCCTTTC TCGACGGGCG CGTCCGTTTC CCGGAAATCG CGAGTATCAT CGAGGACGTC
CTGCAGGGTG AGCCGGTCGT CGCCATCGAC GATCTCGAAA CCGTGCTGCA CGTGGACATC
CAGGCCCGCG CGCGGGCCCA GGCCTGGTTG CTGCGCCGTG AGCGCTGA
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| Protein sequence | MNPQRITVLG ATGSIGLSTL DVIARHPERY RAFALTGFTR LDELRALCLR FAPCYAVVPE
AAAACRLEDE LRAAGLDTRV LFGSEGLCEV AAHPEADAVM AAIVGAAGLR PTLAAVEAGK
KVLLANKEAL VMSGALFMQA VRRSGAQLLP IDSEHNAIFQ CLPAAYGNGL ATVGVRRILL
TASGGPFRET PAAELIEVTP AQACAHPNWS MGRKISVDSA SMMNKGLELI EACWLFDARP
AQVEVVVHPQ SVIHSLVDYI DGSVLAQLGN PDMRTPIAHA LAWPERIDSG VVPLDLFSIA
RLDFQAPDPA RFPCLRLARE AAEVGGSAPA MLNAANEVAV AAFLDGRVRF PEIASIIEDV
LQGEPVVAID DLETVLHVDI QARARAQAWL LRRER
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