Gene Avin_38920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_38920 
SymbolmucP 
ID7762781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3938655 
End bp3940007 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content66% 
IMG OID643806755 
Productmembrane-associated zinc metallopeptidase MucP 
Protein accessionYP_002801007 
Protein GI226945934 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.241633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCC TGTACATGAT CATCGGCACC CTGATAGCGC TCGGAGTGCT GGTCACCTTC 
CATGAGTTCG GCCATTTCTG GGTCGCCCGT CGCTGTGGCG TCAAGGTATT GCGCTTTTCC
ATCGGCTTCG GCATGCCCTT GCTACGCTGG CACGATCGGC AGGGAACCGA GTTCGTGATC
GCTGCGATTC CCCTGGGCGG TTATGTCAAG ATGCTCGACG AGCGCGAGGG TGAGGTTCCC
CCGGCGTTGC TCGACCGGAC CTTCAACCGC CAGGGCGTCC GTCGACGCAT CGCCATCGTG
GCGGCCGGTC CCGCCGCCAA CTTCCTGCTC GCCCTGTTGT TCTTCTGGGT GCTCGCCATG
CTCGGCAGCC AGCAGTTGCG TCCGGTCATC GGCGCCGTGG AGGCGGGCAG TCCGGCGGCG
GTCGCGGGAA TCCAGGCCGG CGAAGAGGTT CTCGCGGTGG ATGGCGAGGA GACGTCCGGC
TGGGCAGCGG TCAACCTGCA GATGATTCGT CGTCTGGGGG AGACCGGCAC GCTCGAGGTC
ACCGTGCGCG AGGCGGGTTC CAGCGTGACG GCCCGGCGTC ACCTGGTCAT CCGGGACTGG
CTCGAGGGAG TCGATGAGCC CGATCCCATC GCGAGTCTCG GCATTCGCCC GTGGCGGCCC
GCCCTGCCGC CGGTGCTGGC GCAACTGGAC CCGAAGGGAC CGGCACAGGC GGCCGGGCTG
CGCGGCGGCG ACCGCCTGCT GGCGCTCGAC GGGGAGCCGC TGGATGACTG GCAACGGGTC
GTCGAGCGGG TGCGCGCCCG CCCCGGCGCG CGCGTCGTCT TCCTGCTCGA GCGCGACGGT
CAGCGTATCG AGCGGCCGGT CGAACTGGCG GCTCGCGGCG AAGGCGAGGC GCGCAGCGGC
TATCTCGGCG CCGGCGTGGA GACGGTCGAA TGGCCGCCGG AAATGCTTCG TGAGGTCCGC
TACGGTCCGC TGGAGGCGGT TGGCGAGGCC CTTCGGCGGA CCTGGAGCAT GAGTGTCCTG
ACCCTCGATT CCCTTAGGAA AATGCTCTTC GGCGAGCTCT CGGTAAAAAA CTTGAGCGGA
CCGATAACCA TTGCTAAAGT GGCGGGCGCT TCGGTCCAGT CAGGGGTGGG AGACTTCCTG
AATTTTCTCG CCTATCTGAG CATAAGCTTG GGGGTGCTCA ATCTGCTGCC GATTCCGGTG
CTCGATGGCG GGCATCTGCT TTTCTATTTC GTCGAGTGGG CCCGGGGGCG CCCCTTGTCG
GAACGAGTCC AGGCTTGGGG AATGCAGATT GGGATCAGTC TTGTCGTTGG GGTCATGCTG
CTGGCTTTGG TCAATGATCT GAGTCGCTTG TGA
 
Protein sequence
MNALYMIIGT LIALGVLVTF HEFGHFWVAR RCGVKVLRFS IGFGMPLLRW HDRQGTEFVI 
AAIPLGGYVK MLDEREGEVP PALLDRTFNR QGVRRRIAIV AAGPAANFLL ALLFFWVLAM
LGSQQLRPVI GAVEAGSPAA VAGIQAGEEV LAVDGEETSG WAAVNLQMIR RLGETGTLEV
TVREAGSSVT ARRHLVIRDW LEGVDEPDPI ASLGIRPWRP ALPPVLAQLD PKGPAQAAGL
RGGDRLLALD GEPLDDWQRV VERVRARPGA RVVFLLERDG QRIERPVELA ARGEGEARSG
YLGAGVETVE WPPEMLREVR YGPLEAVGEA LRRTWSMSVL TLDSLRKMLF GELSVKNLSG
PITIAKVAGA SVQSGVGDFL NFLAYLSISL GVLNLLPIPV LDGGHLLFYF VEWARGRPLS
ERVQAWGMQI GISLVVGVML LALVNDLSRL