| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38770 |
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| Symbol | ispD |
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| ID | 7762766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3920337 |
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| End bp | 3921047 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643806740 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002800992 |
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| Protein GI | 226945919 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC CCGATTTGCC ATTCTTCTGG GCCGTGATCC CGGCCGCCGG TATCGGCAGC
CGCATGCGTG CCGATCGTCC CAAGCAATAT CTGCCGCTCG GCGGCAGGAC CATTCTCGAA
CATACCCTCG ACTGCTTCCA CGGCCACCCC CGGCTGAAAG GGCTGGCAGT CAGCCTGGCG
CAGGACGATC CCTACTGGTC GCGGCTGCCG TGCGCCGCCG ATGAGCGCAT CCTGCGCGCC
GCCGGTGGCC GCGAGCGCGC CGATTCGGTG TTCAACGCCC TGCAACTGCT CGCCGCTCGG
GGCGCGGATG CCGCGGACTG GGTTCTGGTG CACGACGCCG CACGGCCGAA TCTGGCCCGC
GTCGATCTGG ATCGGCTGCT GGCCGAACTG GCCGACGATC CGCTGGGCGG GCTGCTGGCG
GTGCCGGCGC GGGACACCCT GAAGCGCGCC GATGCCGACG GCCGGGTGCG CGAGACCGTG
GATCGCTCGA CGATCTGGCA GGCCTATACG CCACAGATGT TCCGCCTGGG GGCCTTGCGC
CAGGCTCTGG ACGATGCGCT GCGGGCAGGC GTGGCGATCA CCGACGAGTC CTCCGCCATG
GAATGGGCCG GGTACGCCCC TCGGCTGATC GAGGGGCGAG CCGACAACCT GAAGATCACC
CGCCCGGAGG ACCTGCTCTG GCTGCAGCAG GTCTGGACCC GAAAGCGCTA G
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| Protein sequence | MNIPDLPFFW AVIPAAGIGS RMRADRPKQY LPLGGRTILE HTLDCFHGHP RLKGLAVSLA
QDDPYWSRLP CAADERILRA AGGRERADSV FNALQLLAAR GADAADWVLV HDAARPNLAR
VDLDRLLAEL ADDPLGGLLA VPARDTLKRA DADGRVRETV DRSTIWQAYT PQMFRLGALR
QALDDALRAG VAITDESSAM EWAGYAPRLI EGRADNLKIT RPEDLLWLQQ VWTRKR
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