Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_38730 |
Symbol | ispF |
ID | 7762762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3917549 |
End bp | 3918022 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643806736 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_002800988 |
Protein GI | 226945915 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATCG GACACGGCTA TGACGTGCAC CGTTTCGCCG AGGGTGATTT CGTCACTCTC GGCGGGGTGC GGATTCCTCA TCGTTTCGGG CTGCTCGCCC ATTCCGACGG CGACGTGCTG CTGCACGCGC TCTGCGACGC GCTGCTCGGC GCCGCGGCGC TGGGCGATAT CGGCCGGCAT TTCCCTGACA CCGATCCTCG CTTCAAGGGT GTCGACAGTC GCGTGCTGCT GCGCCATGTC GTGGCGCTGG TGCGGGAAAA GGGCTGGCGG GTCGGCAATG TCGACGCCAC CATAGTCGCG CAGGCGCCGA AAATGGCTCC GCATATCGAA CGCATGCGTC TGTCGATCGC CGAAGACCTG CAGGTCGGCG TGGAGCAGGT CAACGTCAAG GCCACCACCA CCGAAAAGCT CGGCTTCACC GGCCGCGAGG AAGGGATCGC CGTGCATGCG GTGGCCCTGT TGCTGGCGCT ATGA
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Protein sequence | MRIGHGYDVH RFAEGDFVTL GGVRIPHRFG LLAHSDGDVL LHALCDALLG AAALGDIGRH FPDTDPRFKG VDSRVLLRHV VALVREKGWR VGNVDATIVA QAPKMAPHIE RMRLSIAEDL QVGVEQVNVK ATTTEKLGFT GREEGIAVHA VALLLAL
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