Gene Avin_38480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_38480 
SymbolfinR 
ID7762738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3891206 
End bp3892132 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID643806712 
ProductFinR, transcriptional regulator, LysR-family 
Protein accessionYP_002800964 
Protein GI226945891 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTCA CTCTGCGCCA GCTTGAGGTA TTCGCCGCCG TGGCCCGTCT GGAAAGTGTC 
ACCCGCGCGG CCGAATCCCT CTCCCTCTCC CAGTCCGCGG CCAGCACCTC GCTGACCGAA
CTCGAGCGCC AATCGGACTG CCAGCTCTTC GATCGCGTCG GCAAGCGCCT GAAGCTCAAC
GCCCTGGGCC GGCAACTGCT GCCCCAGGCG GTGGCGCTGC TCAACCAGGC GCGGGAAATC
GAGAATCTGC TCGACGGAAA GGAAGGCTTC GGCTCGCTGG CCGTGGGCGC CACGCTGACC
GTGGGCAACT ACCTGGCGAC CCTGCTGATC GGCGCCTTCA TGCAGCGTCA TCCGGAATCG
CGGGTCCGGC TGCACGTGCA GAACACCGCG CATATCGTCC AGCAAGTGGT CAACCACGAA
CTGGATCTCG GCCTGATCGA AGGCAACTGC CAGCATCCCG ACGTGGAACT GCAACCCTGG
GTGGAAGACG AGCTGGTGGT GTTCTGCGCC CCGCAACACC CCTTGGCGCG GCATGGCCGG
GCGACTCTGG ACGAACTCGC CGGGGAGGCC TGGATCCTTC GCGAGCAGGG CTCGGGCACG
CGCCTGACCT TCGATCAGGC CATGCGTCAT CATCGGCCGA TGCTGAACAT CCGCCTGGAA
CTGGAGCATA CCGAGGCGAT CAAACGCGCG GTCGAGTCCA GCCTGGGGAT CGGTTGCATC
TCCCGCCTGG CCCTGCGCGA TGCCTTCCGC CGCGGAAGTC TGGTGCCGGT GGAAACGCCG
CAATTGGATC TGAAGCGGCA GTTCTGCTTC CTCTGGCACA AGCAGAAGCT GCATACCGCA
GCCATGCGCG AGTTTCTCGA ACAATGCCGG GCGCTGACCG CCGGCGTACG GCGCAGCGAC
GAGATCGTCC TGCCGCCGAT CGCCTGA
 
Protein sequence
MRFTLRQLEV FAAVARLESV TRAAESLSLS QSAASTSLTE LERQSDCQLF DRVGKRLKLN 
ALGRQLLPQA VALLNQAREI ENLLDGKEGF GSLAVGATLT VGNYLATLLI GAFMQRHPES
RVRLHVQNTA HIVQQVVNHE LDLGLIEGNC QHPDVELQPW VEDELVVFCA PQHPLARHGR
ATLDELAGEA WILREQGSGT RLTFDQAMRH HRPMLNIRLE LEHTEAIKRA VESSLGIGCI
SRLALRDAFR RGSLVPVETP QLDLKRQFCF LWHKQKLHTA AMREFLEQCR ALTAGVRRSD
EIVLPPIA