Gene Avin_38460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_38460 
Symbol 
ID7762736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3889536 
End bp3890258 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID643806710 
Producthypothetical protein 
Protein accessionYP_002800962 
Protein GI226945889 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCTC GCTCGCACCT ACCGGCCATC ATGTCCCATC TCGTTTCGCC GATCGGCTAC 
CTGCGCTCCT GCTTCAAGGA AAAGTTCACC ATTCCGCGCC AGCCGCAACT GGCGCCGGCC
GCCCGCGGCG TGCTGGAGCT ACTGCCGCCC TTCGATCAGG GGCAGGCCGT CGAGGGACTC
GAGCAGGTCA GTCATGTCTG GCTACTGTTT CTCTTCCACC AGGCCCTGGA GGAAAAGCCA
CGCCTCAAGG TCCGCCCTCC CCGCCTGGGC GGCAACCGCT CGCTCGGCGT GTTCGCCACT
CGCTCGACCC ACCGGCCGAA CGGCATCGGC CAGTCGGTGG TCCGCCTGGA CAAGGTCGAT
GCCGGACGCC TGTGGCTGTC CGGCATCGAC CTGCTGGACG GCACGCCGGT GCTCGACGTC
AAGCCCTACG TTCCCTATGC CGACTGCCTT CCGCAAGCCC ACAACGCCAT TGCCGAGACG
CCGCCGCTGG CGATTCCCGT CGACTGGAGC GAACCGGCAC GGCTGCAGGC ACAGGCGCAT
GCCGCTCGTC TCGGCGAGCC GCTGGTCGAG TTGATCGGAC AGTGCCTGGC CCAGGACCCA
CGCCCCGCCT ATCAGGTACC GGAACCTTCG CGCCGCTACG GCGTGCGCTT CTGGGACGTG
GAAGTGCGCT GGCACTACCC GCGGCCGGGA CGAATCCGCG TGCTGGAAGT GCTGCCGGCC
TGA
 
Protein sequence
MAPRSHLPAI MSHLVSPIGY LRSCFKEKFT IPRQPQLAPA ARGVLELLPP FDQGQAVEGL 
EQVSHVWLLF LFHQALEEKP RLKVRPPRLG GNRSLGVFAT RSTHRPNGIG QSVVRLDKVD
AGRLWLSGID LLDGTPVLDV KPYVPYADCL PQAHNAIAET PPLAIPVDWS EPARLQAQAH
AARLGEPLVE LIGQCLAQDP RPAYQVPEPS RRYGVRFWDV EVRWHYPRPG RIRVLEVLPA