| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38260 |
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| Symbol | pcaH |
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| ID | 7762717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3871309 |
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| End bp | 3872028 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643806691 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_002800943 |
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| Protein GI | 226945870 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGC TCGATACCCG CCGTTTCGTC GCCCGCGATC GGAATTGGCA GCCGAAAGGT
TATACCCCGG ATTACAAGAC CACCATCGCT CGCTCGCCGA GCCAGGCGCT GGTCAGCATC
CCGCAGTCCC TCTCGGAAAC CACCGGTCCC GACTTCAGCC ATCTGAAGCT GGGCAAGTAC
GACAACGACC TGCTGCTCAA CTTCAACCAT GGCGGCCTGC CGGTCGGCGA GCGCGTCATC
ATGTGCGGCC GGGTGGTCGA CCAGTACGGC AAGCCGGTTC CGCACACCTT GGTGGAAATG
TGGCAGGCCA ACGCCGGCGG CCGCTACCGC CACAAGAACG ACAGCTACCT GGCGCCGCTG
GACCCCAACT TCGGCGGGGT CGGCCGCACC CTGACCGACG CCGACGGCTA CTACTACTTC
CGCACCATCA AGCCGGGCCC CTACCCGTGG CGCAACGGCC CCAACGAGTG GCGCCCGTCG
CACATCCACG TGTCCATCAG CGGCCCGTCG ATCGCCACCA AGCTGATCAC CCAGATGTAC
TTCGAGGGCG ACCCGCTGTT TCCAAAGTGC CCGATCATCC GCGCCATCGC CAACCCGGCC
GCCGCCGAGA CCCTGATCGG CCGTCTGGAC CTGAGCAGCA ACGTGCCGAT GGATTGCCTG
GCGTACCGCT TCAATATCGT GCTGCGCGGC CAGCGCCAGA CCCGTTTCGA GAACCAGTGA
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| Protein sequence | MSELDTRRFV ARDRNWQPKG YTPDYKTTIA RSPSQALVSI PQSLSETTGP DFSHLKLGKY
DNDLLLNFNH GGLPVGERVI MCGRVVDQYG KPVPHTLVEM WQANAGGRYR HKNDSYLAPL
DPNFGGVGRT LTDADGYYYF RTIKPGPYPW RNGPNEWRPS HIHVSISGPS IATKLITQMY
FEGDPLFPKC PIIRAIANPA AAETLIGRLD LSSNVPMDCL AYRFNIVLRG QRQTRFENQ
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