Gene Avin_38250 details

Gene Information

• Locus tag: Avin_38250
• Symbol: pcaG
• ID: 7762716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 3870690
• End bp: 3871295
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643806690
• Product: protocatechuate 3,4-dioxygenase, alpha subunit
• Protein accession: YP_002800942
• Protein GI: 226945869
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG3485] Protocatechuate 3,4-dioxygenase beta subunit
• TIGRFAM ID: [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTACG AACTGCTGCC GGAAACCCCC TCGCAGACCG CCGGCCCCTA CGTGCACATC 
GGCCTGGCCG GCGCCGCCGC CGGCAACCCG ACCCGCGAGC AGGAAATCTG GAACGAGATG 
GCCAAGGACG ATGCGCCGGG CGAGCACATC ATCCTGATCG GCAAGGTCGT CGACGGCAAC 
GGCCACCTGA TCCGCGACTC CTACCTGGAG CTCTGGCAAG CCAACCACGA GGGCGTCTAC 
GACACCGTCT ATGACCTGGA AAAGTCGTTC AACGGTTTCG CCCGCACCGC GACCACCTTC 
GACGCCGGCG AGTGGACAGT GAAGACCGTC AAGCCGGGGG TGGTGAAGAA CGCCGCCGGC 
AAGCCGATGG CGCCGCACAT CAGCGTGTCG CTGTTCGCCC GCGGCATCAA CATCCACCTG 
CAGACCCGCA TCTACTTCGA CGACGAGGTC GAGGCCAACG CCGCCGATCC GGTGCTGAAC 
CTGATCGAGC AGCCGGAACG CCGCAAGACC CTGATCGCCA AGCGCTGCGA GGTGGACGGC 
AAGACCGCCT ACCGCTTCGA CATCCGCGTG CAGGGCGAAG GGGAAACGGT GTTCTTTGAC 
TTCTGA 

 

Protein sequence

MNYELLPETP SQTAGPYVHI GLAGAAAGNP TREQEIWNEM AKDDAPGEHI ILIGKVVDGN 
GHLIRDSYLE LWQANHEGVY DTVYDLEKSF NGFARTATTF DAGEWTVKTV KPGVVKNAAG 
KPMAPHISVS LFARGINIHL QTRIYFDDEV EANAADPVLN LIEQPERRKT LIAKRCEVDG 
KTAYRFDIRV QGEGETVFFD F