| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38230 |
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| Symbol | pcaR |
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| ID | 7762714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3868700 |
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| End bp | 3869539 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643806688 |
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| Product | Transcriptional regulator PcaR |
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| Protein accession | YP_002800940 |
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| Protein GI | 226945867 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGT CGCGTCAGGC CGTGCCCACC CTTGCGCCGC CGCCCTATAT TTCCCCCGCC
AAGCGCATCG AGGCCCTGAG CGGCGATCCG AATTTCATGA CCTCCCTGGC TCGCGGCCTG
GCGGTGATCG GCGCCTTCCA GGAGCGCAAG CGCCACCTGA CCATCGCCCA GATCAGCCAC
CGCACCGAGA TTCCGCGCGC CGCCGTGCGC CGTTGTCTGC ATACCCTGAT GAAGCTCGGT
TTCGCCACCA CCGACGGGCG CACCTATTCG CTGACCCCCA AGGTACTGAC CCTCGGCCAC
GCCTACCTGT CCTCCACGCC GCTGGCGGTG TCCGCGCAGC CCTACCTCGA TCGCATCAGC
GAACAACTGC ACGAGGCCTG CAACCTGGCC ACCCTGGAAG GCGAGGAGGT GCTTTACATC
GCCCGCTCGG CGATACCGCA ACGGCTGATC TCGGTCGACC TCAGCGTCGG CAGCCGACTA
CCGGCCTACT GCACCTCGAT GGGCCGCGTG CTGCTCGCCG CGCTGGACGA CGTCAGCCTG
CAGGAATACC TGGAACACGC CGACCTGCTG GCCAAGACCA GCCGCACCCT GCACAGCCGC
GAGGCGCTCT GGGAGTGCCT GCAGCAGGTG CGCCGGCAGG GCTGGTGCAT CGTCGACCAG
GAGCTGGAGC AGGGCCTGCG CTCGCTGGCG GTGCCGGTCC AGGATTCCTC GGGACGGGTA
CTGGCGGCGA TGAACGTCAG CACTCACGCC GGGCGCGTGA CCATCGCCGA GCTGGAAAAG
CGCTACCTGC CGATCATGCT GGCGGCCAGC CGCGACCTGA GCGCCCAGTT GTTCGCCTGA
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| Protein sequence | MSESRQAVPT LAPPPYISPA KRIEALSGDP NFMTSLARGL AVIGAFQERK RHLTIAQISH
RTEIPRAAVR RCLHTLMKLG FATTDGRTYS LTPKVLTLGH AYLSSTPLAV SAQPYLDRIS
EQLHEACNLA TLEGEEVLYI ARSAIPQRLI SVDLSVGSRL PAYCTSMGRV LLAALDDVSL
QEYLEHADLL AKTSRTLHSR EALWECLQQV RRQGWCIVDQ ELEQGLRSLA VPVQDSSGRV
LAAMNVSTHA GRVTIAELEK RYLPIMLAAS RDLSAQLFA
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