Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_38200 |
Symbol | pcaF |
ID | 7762711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3865658 |
End bp | 3866863 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643806685 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_002800937 |
Protein GI | 226945864 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCG ACGTCTTCAT CTGCGATGCC GTGCGCACGC CCATCGGCCG CTTCGGCGGC GGCCTGGCCG GCGTGCGCGC CGACGACCTG GCCGCCATCC CGCTGAAGGC GCTGCTGGCG CGCAACCCGC GACTCGATCC GGCCGCCGTC GATGAGGTGT TCCTGGGCTG CGCCAACCAG GCCGGCGAGG ACAACCGCAA CGTGGCGCGC ATGGCGTCGC TGCTCGCCGG CCTGCCGGAG ACGGTGCCGG GGGTGACACT CAACCGCCTG TGCGCCTCGG GCATGGATGC GATCGGCACC GCCGCCCGCG CCATCGCCAG CGGCGAGATC GAGCTGGCCA TCGCCGGCGG CGTGGAGTCC ATGTCGCGTG CGCCCTTCGT GATGGGCAAG GCCGACGCCG CCTTCTCGCG CAACATGAAG ATCGAGGACA CCACCATCGG CTGGCGTTTC GTCAACCCGT TGATGAAGCA GCAGTACGGC GTGGACTCCA TGCCGGAAAC CGCCGACAAC GTCGCCGACG ACTACCGGAT CGGCCGCGCC GACCAGGACG CCTTCGCCCT GCGCAGCCAG CAGCGCGCGG CGGCGGCCAT GGAGTCCGGC TACTTCGCCG AGGAGATCGT CCCGGTGGTC ATCAAGACCA GGAAGGGCGA GACGCTGATC GACACGGACG AGCATCCGCG CCCGGACACC AGCGCCGAGG CGCTGGCCAG GCTCAAGCCG GTCAACGGCG AGGGCAAGAC GGTTACCGCC GGCAACGCCT CGGGGGTCAA CGACGGCGCC GCGGCGCTGA TCCTGGCCTC CGCCGAGGCG GTGCGCAAAT ACGGCCTGAA GGCCCGCGCC CGGGTGCTCG GCATGGCCAG CGCCGGGGTC GCGCCGCGGA TCATGGGCTA CGGCCCGGTG CCGGCGGTGC GCAAGCTCCT GCAGCGCTTG GAGCTGAGCA TCGACGCCTT CGATGTGATC GAACTCAACG AGGCCTTCGC CAGCCAGGGC CTGGCGGTAT TGCGCGACCT GGACCTCGCC GACGACGATG CGCGGGTCAA CCCCAACGGC GGCGCCATCG CCCTCGGCCA CCCGCTGGGC ATGAGCGGCG CGCGCCTGGT GCTGACCGCC CTGCATCAAC TGGAGAAGTC CGGCGGCAGC AAGGGCCTGG CGACCATGTG CATCGGCGTC GGCCAGGGGC TGGCGCTGGC CATCGAGCGC GTCTGA
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Protein sequence | MSRDVFICDA VRTPIGRFGG GLAGVRADDL AAIPLKALLA RNPRLDPAAV DEVFLGCANQ AGEDNRNVAR MASLLAGLPE TVPGVTLNRL CASGMDAIGT AARAIASGEI ELAIAGGVES MSRAPFVMGK ADAAFSRNMK IEDTTIGWRF VNPLMKQQYG VDSMPETADN VADDYRIGRA DQDAFALRSQ QRAAAAMESG YFAEEIVPVV IKTRKGETLI DTDEHPRPDT SAEALARLKP VNGEGKTVTA GNASGVNDGA AALILASAEA VRKYGLKARA RVLGMASAGV APRIMGYGPV PAVRKLLQRL ELSIDAFDVI ELNEAFASQG LAVLRDLDLA DDDARVNPNG GAIALGHPLG MSGARLVLTA LHQLEKSGGS KGLATMCIGV GQGLALAIER V
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