Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_38190 |
Symbol | pcaB |
ID | 7762710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3864073 |
End bp | 3865425 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643806684 |
Product | 3-carboxy-cis,cis-muconate cycloisomerase |
Protein accession | YP_002800936 |
Protein GI | 226945863 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.569484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAACC AACTCTTCGA TGCCTACTTC ACCAGCGCGC CGATGCGCGC GGTGTTTTCC GACCGCGGGC GGCTGCAGGG CATGCTCGAT TTCGAGGCCG CGCTGGCGCG AGCCGAAGCG GCGGTCGGGC TGATTCCCGA GGCCGCCGTG GCGCCGATCG CCGAGGCCTG CGTGGCCGAG CGCTTCGATG TCGCCGCCCT GGCTCTGGCC ATCGCCACCG CCGGCAATTC GGCGATTCCG CTGGTCAAGG CGCTCGGCCG ACGGATCGCC GCCGTGGATG CCGACGCCGA ACGTTACCTG CACCTCGGCG CCACCAGCCA GGACGCCATG GACAGCGGCC TGGTGCTGCA ACTGCGCGCC GCCGTCGCGC TGTTCGAAAG CGAGCTGGCG CAACTGGCCG AAGACCTCGC CGTGCAGGCC GAGCGCCACG CCGACACGGC GCTGGCCGGA CGCACCTGGC TGCAGCACGC CACCCCGGTG ACCCTCGGCA TGAAGCTCGC CGGCCTGCTC GGCGCCGTCA CCCGCCAGCG CCGGCGGCTG GCCGAGCTGA AGCCGCGCCT TCTGGTCCTG CAGTTCGGCG GTGCCGCCGG CACCCTGGCG GCGCTGGGCG AGCAGGCCCT GCCGGTTTCC GAGGCGCTGG CCCGCGAACT CGACCTGGGC CTGCCCGAGC AGCCCTGGCA TACCCAGCGC GACCGCCTGG CCGAGTTCGC CGGCTGGCTG GGGCTCTTGG CCGGTACTCT CGGCAAGCTC GGCCGCGACC TGTCGCTGCT GATGCAGACC GACGTCGGCG AAGTGTTCGA GCCCTCGGCG CCGGGCAAGG GCGGCTCCTC GACCATGCCG CACAAGCGCA ACCCGGTCGG CGCCGCCGTA CTGATCGGCG CCGCCACCCG CGCGCCGGGG CTGGTCGCCA CCATGCTCGC CGCCATGCCC CAGGAACACG AGCGCAGCCT CGGCCTCTGG CATGCCGAGT GGGAAACCCT GCCCGAGCTG TGCTGTCTGC TTTCCGGCGC CCTGCAGCAG GCGCGCCTGC TGTTGCCGGG ACTGGAGGTG GATGCCGCGC GCATGCGCGA GAACCTCGAC CTGACCCGGG GGCTGGTGCT CGCCGAGGCG GTGAGCATCG CCCTGGCCCG GAAGCTGGGC CGCGAGCGTG CTCATCATCT GGTCGAGCAG TGTTGCCGCC AGGCCATCGC CGAGGGACGC CACCTGCGCG CCGCGCTCGG CGCCGATCCC GAGGTGAGCG CCGAGCTGTC CGCCGCCGAA CTGGAGCGCC TGCTCGATCC GTCCCATTAC CTAGGCCTGG CGCAGCGCTG GGTCGCCCGT GCGGTGGCCG AACACCGCGC CACCCACTGT TAG
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Protein sequence | MSNQLFDAYF TSAPMRAVFS DRGRLQGMLD FEAALARAEA AVGLIPEAAV APIAEACVAE RFDVAALALA IATAGNSAIP LVKALGRRIA AVDADAERYL HLGATSQDAM DSGLVLQLRA AVALFESELA QLAEDLAVQA ERHADTALAG RTWLQHATPV TLGMKLAGLL GAVTRQRRRL AELKPRLLVL QFGGAAGTLA ALGEQALPVS EALARELDLG LPEQPWHTQR DRLAEFAGWL GLLAGTLGKL GRDLSLLMQT DVGEVFEPSA PGKGGSSTMP HKRNPVGAAV LIGAATRAPG LVATMLAAMP QEHERSLGLW HAEWETLPEL CCLLSGALQQ ARLLLPGLEV DAARMRENLD LTRGLVLAEA VSIALARKLG RERAHHLVEQ CCRQAIAEGR HLRAALGADP EVSAELSAAE LERLLDPSHY LGLAQRWVAR AVAEHRATHC
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