| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38170 |
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| Symbol | pcaC |
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| ID | 7762708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3862438 |
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| End bp | 3862830 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643806682 |
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| Product | 4-carboxymuconolactone decarboxylase |
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| Protein accession | YP_002800934 |
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| Protein GI | 226945861 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.230767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGAGA AAGAACGTTA TGACGCCGGC ATGCAGGTGC GCCGTGCGGT GCTCGGCGAC
GCCCATGTCG ACCGCAGCCT TAAGAACCTG ACGCCGTTCA ACGAGGAGTT CCAGGAAATG
ATCACCCGGC ATGCCTGGGG CGACATCTGG ACCCGTCCGG GCCTGCCGCG CCACACCCGC
AGCCTGATCA CCATCGCCAT GCTGATCGGC ATGAACCGCG AGGGCGAGCT GAAGCTGCAC
CTGCGCGCGG CCAGGAACAA CGGCGTGACC CGCGACGAGA TCAAGGAAGT GCTGATGCAG
AGCGCCATCT ACTGCGGGAT TCCCGCGGCC AACGCCACTT TCCACCTGGC CGAGTCGGTG
TGGGACGAAC TGGGCGTCGA GTCCCTGGCG TGA
|
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| Protein sequence | MDEKERYDAG MQVRRAVLGD AHVDRSLKNL TPFNEEFQEM ITRHAWGDIW TRPGLPRHTR
SLITIAMLIG MNREGELKLH LRAARNNGVT RDEIKEVLMQ SAIYCGIPAA NATFHLAESV
WDELGVESLA
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