Gene Avin_38160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_38160 
Symbol 
ID7762707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3861508 
End bp3862374 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID643806681 
Producthypothetical protein 
Protein accessionYP_002800933 
Protein GI226945860 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.863568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTAT CCCGCCCGCT CATGGGCATC CTGCTGAGCT GTATCGCCGT GCTGGCCTTC 
GCTTCCCACG ACAGCCTGGC GAAGCAGCTC GCCGCTTCCA ACGGCGTATT GATGGTCCTC
TGGGTACGCT ATCTGTCGCA GAGCCTGCTG CTCGCCGCCT GGCAACTGCC GCGCCACGGC
TGGCGCGTGC TGCGGGTCAA CTGCCCGGGG CTGCAACTGC TGCGCGGGCT GTCGCTGCTG
TCGATCAGCC TGTTCTTTCT TTCCGCCTTG AGGCTGCTGC CGCTGGCCGA GGCCACCGCC
GTGCACTTCA TCGCGCCGCT GCTGGTGATC CTGCTGGCGA TGCCGCTGCT CGGCGAGCGC
GCCAATCCCG GCCAGTGGCT GGCGGTCGGT GTCGGCTTCC TCGGCGTGCT GATCATCGTC
CGTCCCGGCG GCGGACTGCT CACCCCGGCC ATGCTGCTGC CGGTGGCGTC GGCCACCTGC
TACGCGCTCT ACCAGTTGCT GACCCGGCGC ATCGGCACCC GCGACAGCGC CGGCGCCACC
AACCTGGTCA CCGGGCTGGT CGGCGCGACC GGCATGACCC TGCTGCTGCC GCTGTTCTGG
CAGGGCCTGC CGCCCTGGCC GCAACTGCTG GCCATGGCCG CGCTGGGCGC GATCGCCGTC
GGCGGGCACA TGCTGCTGAC CATCGCCTTC CAGTACAGCT CGCCGGTGTC GCTGGCGCCG
TTCAGTTACC TGCAGATCCT CTTCGCCGTG CTGCTCGGCC TGCTGCTGTT CGACCATGCG
CCGGATAGCG GCGCCCTGCT GGGCATGGGC GTCATCGCCC TGAGCGGCCT GGGCAGCGCC
TGGCTGCAGG CGCGGCGCCA CCTGTAA
 
Protein sequence
MSLSRPLMGI LLSCIAVLAF ASHDSLAKQL AASNGVLMVL WVRYLSQSLL LAAWQLPRHG 
WRVLRVNCPG LQLLRGLSLL SISLFFLSAL RLLPLAEATA VHFIAPLLVI LLAMPLLGER
ANPGQWLAVG VGFLGVLIIV RPGGGLLTPA MLLPVASATC YALYQLLTRR IGTRDSAGAT
NLVTGLVGAT GMTLLLPLFW QGLPPWPQLL AMAALGAIAV GGHMLLTIAF QYSSPVSLAP
FSYLQILFAV LLGLLLFDHA PDSGALLGMG VIALSGLGSA WLQARRHL