| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38080 |
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| Symbol | |
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| ID | 7762699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 3852824 |
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| End bp | 3853678 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643806673 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002800925 |
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| Protein GI | 226945852 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.797056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA AACCGCACAG CATCCTCGCC GGCCTGATCG GCGCAGGCAT CCAGGCCTCG
CGCACGCCGG CCATGCACGA GCACGAGGGC GACGCCCAAG GCATCCGCTA TCTGTACCGG
CTGATCGATC TGGACAAGCT CGGCCTGACG ACCGAAGCCC TGCCGGAGCT GCTGAGCGCG
GCCGAGCGCA TGGGCTTCAC CGGCCTGAAC ATCACTTTCC CCTGCAAGCA GGCGGTCATC
CCGCTGCTCG ACGAGCTGTC GGCGGAGGCC CGCGGCATCG GCGCGGTGAA CACCGTGGTG
TTCAAGGACG GCAAGCGCAT CGGCCACAAC ACCGATTGCC TGGGCTTCGC CGAGGGCTTC
CGGCGCGGCC TGCCGGGCGT GGCGCGCGAA CGCGCGGTAC AGATGGGGGC CGGCGGCGCC
GGTGCCGCGG TGGCGCATGC CCTGCTGCAG GCGGGCGTGC GCCGGCTGAC CATCTTCGAC
GTGGAGCCGA GCCGTGCCGC CGATCTGGCC GCCAACCTCA ACGCCAGCTT CGGCGCCGAC
CGGGCGCTGG CCGGCAGCGA CCTGCCGGCC GCCATGGCCG AAGCCCAGGG GCTGGTCAAC
ACCACCCCGG TCGGAATGGC CAAGCTGCCG GGCATGCCGC TGCCGGCCGA ACTGCTGCAT
GCCGACCTGT GGGTGGCGGA AATCATCTAC TTCCCGCTGG AGACCGAACT GCTGCGCAAC
GCCCGCGCCC TCGGCTGCCT GACCCTCGAC GGCGGCAACA TGGCGGTGTT CCAGGCGGTC
AAGGCGTTCG AGCTGTTCAG CGACGTCCGG GCCGATGCCG GACGGATGAT GGCGCACTTC
GCCAGCCTCG GCTGA
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| Protein sequence | MTAKPHSILA GLIGAGIQAS RTPAMHEHEG DAQGIRYLYR LIDLDKLGLT TEALPELLSA
AERMGFTGLN ITFPCKQAVI PLLDELSAEA RGIGAVNTVV FKDGKRIGHN TDCLGFAEGF
RRGLPGVARE RAVQMGAGGA GAAVAHALLQ AGVRRLTIFD VEPSRAADLA ANLNASFGAD
RALAGSDLPA AMAEAQGLVN TTPVGMAKLP GMPLPAELLH ADLWVAEIIY FPLETELLRN
ARALGCLTLD GGNMAVFQAV KAFELFSDVR ADAGRMMAHF ASLG
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