Gene Avin_37700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_37700 
SymbolpfpI 
ID7762662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3815219 
End bp3815839 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID643806636 
Productcysteine peptidase PfpI protein 
Protein accessionYP_002800889 
Protein GI226945816 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCTTTT CTCGTCCCGT TCAGGAGTTT CCCATGTCCG CCAAGAAGAT CCTCATGCTG 
GTCGGCGACT ATGCTGAAGA CTACGAAACC ATGGTGCCGT TCCAGGCACT GCTGATGGTC
GGCCATACGG TGCATGCCGT GTGCCCGGGC AAGCAGACCG GGCAGAGCGT GCGAACCGCC
ATCCACGATT TCGAGGGCGA CCAGACCTAC AGCGAAAAGC CCGGACACAA CTTCGCCCTG
AATTTCGATT TCGCCCAGGT GCGCGCCGAA GACTACGACG CACTGCTGGT CCCGGGGGGC
CGGGCGCCCG AATACCTGCG CCTCGACGAG CGCGTGCTGG AACTGGTGAG GAACTTCGCC
ACGGCGAACA AGCCGATCGC CGCCGTTTGC CACGGCGCCC AATTGCTGGC GGCGGCCGGC
GTGCTCGCGG GACGTTCGTG CAGCGCCTAC CCGGCCTGCG CCCCGGAGGT GCGACTGGCC
GGTGGCGAAT ATGTGGATGT TCCGCTGGAT CAGGCCCACG TCGACGGCAA CCTGGTCACG
GCGCCGGCCT GGCCGGCGCA TCCTGCCTGG CTGGCAAGGT TCCTCGAACT GCTGGGCACC
CGGATCGTTC ATGAAGGCTA A
 
Protein sequence
MRFSRPVQEF PMSAKKILML VGDYAEDYET MVPFQALLMV GHTVHAVCPG KQTGQSVRTA 
IHDFEGDQTY SEKPGHNFAL NFDFAQVRAE DYDALLVPGG RAPEYLRLDE RVLELVRNFA
TANKPIAAVC HGAQLLAAAG VLAGRSCSAY PACAPEVRLA GGEYVDVPLD QAHVDGNLVT
APAWPAHPAW LARFLELLGT RIVHEG