| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_37070 |
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| Symbol | rumA |
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| ID | 7762601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3764460 |
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| End bp | 3765824 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643806574 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_002800828 |
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| Protein GI | 226945755 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.584008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTAGAC GTACCGGCGG CCTGCGCTTC CAGCCCAGCG GCGGTGCCCG CTCGGCGCCC
CTGCAGGTGG GCAGGAAGCA GGTCCTGAGC ATCGAGCGCC TGGCCCACGA CGGCCGTGGC
ATCGCCTTCG TCGACGGCCG TACCTGGTTC GTCTCCGGCG CCCTGGCCGG CGAGCGGGTC
GAGGCCCGTG TGCTCGGCGC GCGCAACCGT ATCGTCGATG CCCACGCCGA GCGCATCCTG
GCCGCCGGCC CGTTGCGCCG CGCCGCGCCC TGCGCGCATG CCGGCCGTTG CGGCGGCTGC
ACCCTGCAGG CATTGCCCCA TGCCGAGCAA CTGGCCCTGA AGCAGCGCAC CCTCGCCGAG
CAACTGGCGC GCTTCGCCGG CCTCGCACCC GAGGAGTGGG CGCCGCCCCT GGTCGGTCCG
GAATTCGGCT ACCGCCGCCG GGCGCGCATC GCGGTGCGCT GGGATGCCAC CTCCGGGCGG
CTGGAGGTGG GCTTTCGCGC CGCGGCCAGC CAGGCGATCG TCGCCATCGA CGATTGCCCG
GTGCTGGTGC GGCCGCTGCA GCCCATCCTG CGCGCCTTGC CCGCGCTTCT CCACGGTCTG
GCGAGGCCCC GGGCGCTGGG CCATGTCGAG TTGTTCCACG GCAATACAAG CGCCATTCTG
GTGCGCCATA CTGCGCCCCT TGCGGACGCT GACCTGCAGC GCCTGCGCGT CTTCTGTCGC
GAACACGCCG CCCAGCTCTG GCTGCAGGGC AGGGACGAGC CGCGGGCGGA CGCACCGGAG
GCCCCGCTGG GCTACCGCCT GGAGCCCTGG GGACTGGAGC TGCACTACCG TCCCGGCGAC
TTCGTGCAGG TCAACGCCGT GGTGAACGAG GCGATGGTCG TCCAGGCCCT GGAGTGGCTG
GCGCCTCGGC CGGAGGAACG GGTGCTCGAT CTGTTCAGCG GTCTGGGCAA CTTCGCCCTG
CCGCTGGCGC AGCGCTCGCG CGAGGTGGTG GCGGTGGAGG GCGTGGCGCC GATGGTCGAG
CGCGGCAGGG AAAATGCGAC CCGTAATGGA CTGAACAACC TGCACTTCTG GCAAGCGGAC
CTGTCGAAGC CGCTGGCAGG GGCGTCCTGG GCTGCCGCCG GCTTCGCCGC AGTGCTGTGC
GATCCGCCCC GTGACGGCGC GCTGGAGGCC GTGCGGCAGG TGGGCAGCCT GGGAGCCGGG
CGGGTGCTAT ATGTTTCCTG CAATCCGGCG ACCCTGGCAC GGGATGCCAC GGAACTGGCC
GGACAGGGCT ATCGGCTGCG GCGTGCCGGC ATTCTCGATA TGTTCCCGCA GACCGCCCAT
GTCGAGGCCA TGGCGTTGTT CGAGAGAGAG CCCGCGGCGG GCTGA
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| Protein sequence | MTRRTGGLRF QPSGGARSAP LQVGRKQVLS IERLAHDGRG IAFVDGRTWF VSGALAGERV
EARVLGARNR IVDAHAERIL AAGPLRRAAP CAHAGRCGGC TLQALPHAEQ LALKQRTLAE
QLARFAGLAP EEWAPPLVGP EFGYRRRARI AVRWDATSGR LEVGFRAAAS QAIVAIDDCP
VLVRPLQPIL RALPALLHGL ARPRALGHVE LFHGNTSAIL VRHTAPLADA DLQRLRVFCR
EHAAQLWLQG RDEPRADAPE APLGYRLEPW GLELHYRPGD FVQVNAVVNE AMVVQALEWL
APRPEERVLD LFSGLGNFAL PLAQRSREVV AVEGVAPMVE RGRENATRNG LNNLHFWQAD
LSKPLAGASW AAAGFAAVLC DPPRDGALEA VRQVGSLGAG RVLYVSCNPA TLARDATELA
GQGYRLRRAG ILDMFPQTAH VEAMALFERE PAAG
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