Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_37060 |
Symbol | ilvM |
ID | 7762600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3762098 |
End bp | 3764347 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643806573 |
Product | RelA/SpoT protein |
Protein accession | YP_002800827 |
Protein GI | 226945754 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00582579 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACAGG TGAGAGCGCA GCAGCCGGTC AACACCGACG GCAGCATCAA TCTTGAGGCT TGGCTGGATC ATGTCCTGAA GATGGACCCG GCCCTGGAGC GCGAGGCCCT GAAGACGGCC TGCGAGTACG TCCGCGAGGC CGAGCGGCGG GCCCGGCCGG ATGCGGAGAG GCCTGCCGTC GGCACGTCCA CCTTCCTGGT CGGCCTGGAG ATCGCGGAAA TTCTCGCCGA CCTCAAGCTG GACCAGGATT CCCTGGTCGC CGCCGTGCTC TATCGTGGCG TGCGCCAGAA GCAGATCGCC TTGGACGAGG TGCAGCGGCG TTTCGGCCAG GTGGTCGCCA AGCTGATCGA GGGCGTGCTG CGCATGGCGG CGATCAGCGA CAGCCTCAAT CCGCGCGAGT CCCTGGTGCT GGATGCCCAG ACCCAGGTGG AGAACCTGCG CAAGATGCTG GTGGCGATGG TCGACGACGT GCGTGTCGCC CTGATCAAGC TGGCCGAGCG CACCTGCGCG ATCCGCGCGG TCAAGCACGC CGACGAGGAG CGGCGCCAGC GCGTCGCCCG CGAGGTGTCC GCCATCTATG CGCCGCTGGC CCATCGCCTC GGCATCGGTC ACATCAAGTG GGAGCTGGAG GATCTGGCCT TCCGCTACCT CGAGCCCGAG CAGTACAAGC AGATCGCCAA GCTGCTCCAC GAGCGCCGGC TCGATCGCGA GCAGTTCATC GCCAAGGTCG TCCAGGAGCT CAAGGAGGCG CTGGCCGGCG CCGGCATCAA GGCCGACATC AACGGTCGGG CCAAGCACAT CTACTCGATC TGGCGCAAGA TGCAGAAGAA GGGTCTGCAG TTCAGCCAGA TCTACGACGT TCGCGCCGTG CGCGTGCTGG TTCCGGAAGT GCGCGACTGC TATACCGCCC TCGGCATCGT CCACTCGCTG TGGCGGCACA TCCCCAGGGA GTTCGACGAC TACATCGCCA ATCCCAAGGA AAATGGTTAC CGCTCGTTGC ACACCGCGGT GATCGGCCCG GACGGCAAGA CCCTGGAAGT GCAGATCCGC ACCCACGCCA TGCACGAGGA GGCCGAGCTG GGCGTCTGCG CCCACTGGCG CTACAAGGGC ACCGACCTCA AGTCCACTTC CAGCCATTAC GAGGAGAAGA TCGCCTGGCT GCGCCAGGTG CTCGAGTGGC ATGAGGAACT GGGCGACATC GGCGGCCTGG CCGAGCAGTT GCAGGTCGAC ATCGAGCCCG ACCGGGTCTA CGTGTTCACC CCGGACGGCC ACGCCATCGA CCTGCCCAAG GGCGCCACGC CGCTGGACTT CGCCTACCGG GTACACACCG AGATCGGCCA CAACTGCCGC GGCGCCAAGA TCGACGGGCG CATAGTGCCG CTCAACTACA CCCTGCAGAC CGGCGAGCAG GTGGAGATCA TCACCGGCAA GAACGGCTCG CCGAGCCGCG ACTGGCTGAA CTCCAACCTC GGCTACGTCA CCACCTCGCG GGCCCGGGCG AAGATCGTCC ACTGGTTCAA GCTGCAGGCG CGCGACCAGA ACGTCGCCGC CGGCAAGGCG CTGCTCGAGC GCGAACTCGC CCGGCTCGAC CTGGCGCCGG TGGATTACGA CCGGCTGGCG GAAAAGAGCA ACCTGAAGAC CGCCGAGGAC CTGTTCGCCG CCCTCGGCGC CGGCGACCTG CGTCTGGCCC ACGTGGTCGG GCTGGCCCAG CAACTGGTCG AGCCGGAGCG CAGCGCCGGG CAGTTCGAGC TGATTCCGCG CAAGGCCGGC GTTCCGCACA AGCCGGGCAA GCGCGACGAT ATCCAGATCC AGGGTGTGGG CAACCTGCTG ACACAGATGG CCGGCTGCTG CCAGCCGCTG CCCGGCGACC CCATCGTCGG CTACATCACC CAGGGCCGCG GGGTCACCAT CCATCGCCAG GACTGCGCCA ACGCCCTGCA ACTGGCCAGC CGCGAGCCGG AACGGATCAT CCAGGTCAGT TGGGGACCGG TGCCGGTGCA GACCTACCCG GTGGATATCT TCATTCGCGC CTACGACCGT TCCGGCCTGT TGCGTGACGT GTCCCAGGTG CTGCTCAACG AGCGGATCAA CGTGCTGGCC GCCAACACCC TGTCGAACAA GGAAGACAGC ACGGCGCAGA TGGTCCTGAC CATCGAGATC CCCGGACTGG ATGCCCTCGG CCGGCTGCTG GCGCGTATCG CCCAGTTGCC CAACGTGATC GAGGCGCGCC GCCACCGCGC GGTTTCCTGA
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Protein sequence | MVQVRAQQPV NTDGSINLEA WLDHVLKMDP ALEREALKTA CEYVREAERR ARPDAERPAV GTSTFLVGLE IAEILADLKL DQDSLVAAVL YRGVRQKQIA LDEVQRRFGQ VVAKLIEGVL RMAAISDSLN PRESLVLDAQ TQVENLRKML VAMVDDVRVA LIKLAERTCA IRAVKHADEE RRQRVAREVS AIYAPLAHRL GIGHIKWELE DLAFRYLEPE QYKQIAKLLH ERRLDREQFI AKVVQELKEA LAGAGIKADI NGRAKHIYSI WRKMQKKGLQ FSQIYDVRAV RVLVPEVRDC YTALGIVHSL WRHIPREFDD YIANPKENGY RSLHTAVIGP DGKTLEVQIR THAMHEEAEL GVCAHWRYKG TDLKSTSSHY EEKIAWLRQV LEWHEELGDI GGLAEQLQVD IEPDRVYVFT PDGHAIDLPK GATPLDFAYR VHTEIGHNCR GAKIDGRIVP LNYTLQTGEQ VEIITGKNGS PSRDWLNSNL GYVTTSRARA KIVHWFKLQA RDQNVAAGKA LLERELARLD LAPVDYDRLA EKSNLKTAED LFAALGAGDL RLAHVVGLAQ QLVEPERSAG QFELIPRKAG VPHKPGKRDD IQIQGVGNLL TQMAGCCQPL PGDPIVGYIT QGRGVTIHRQ DCANALQLAS REPERIIQVS WGPVPVQTYP VDIFIRAYDR SGLLRDVSQV LLNERINVLA ANTLSNKEDS TAQMVLTIEI PGLDALGRLL ARIAQLPNVI EARRHRAVS
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