Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_36640 |
Symbol | tolB |
ID | 7762559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3724943 |
End bp | 3726235 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643806532 |
Product | translocation protein TolB |
Protein accession | YP_002800786 |
Protein GI | 226945713 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.239695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATACCC TGATTCGTCT CGCCCTGTTC GGATTGGCCT TGTTGGCCGG CATTGCCCAG GCGGCCGATC CGTTGGTGGT GACCAGCGGT ACCGCGCGTG CCACGCCTAT CGCCGTGGTG CCCTTCGGTT GGCAGGGCGG TAGCGTGATG AGCGACGACA TGGCCGAGAT CGTCGGCAAC GACCTGCGCA ATTCGGGTGT CTTCGAGCCG ATTCCCCGGC AGAACATGAT CAGCCAGCCG ACCGGCCCGG GCGAGATCAT CTATCGCGAC TGGAATGCAT TGGGTGCCCA GTATGTGCTG GTCGGCAACA TAGTTCCTGC CGGCGGGCGC CTGCAGGTGC AGTATGCGCT GATGAACGTG GCCACCGAGC AGCAGGTGCT GGCCGGCTCC GTCAGCGGCA GTGGCGACCA GGTACGCGAC ATGGCCCACT ATATCGCCGA CCAGGCGTTC GAGAAGCTCA CCGGCATCAA GGGAGCCTTT TCCACCCGAC TGCTCTATGT CACCGCCGAG CGCATGGGCG GCGGCACCCG CTATACCTTG CAACGAGCCG ACTACGACGG TGCTCGGGCC GTGATCCTGT TGCAATCCCG CGAGCCGATC CTGTCGCCGC GCTTTGCGCC CGATGGCCGA CGCATCGCCT ATGTTTCCTT CGAGCAGAAG CGTCCGCGCA TCTTCATTCA GCATATCGAT ACCGGTCGCC GCGAACAGAT CACCAATTTC GAAGGACTCA ACGGTGCGCC GGCCTTCTCG CCGGATGGTT CCCGCCTGGC CTTCGTGCTG TCCAAGGACG GCAATCCGGA AATCTACGTG ATGAACCTGG CCAGCCGGCA GTTGCAGCGG GTCACCAACC ACTTCGGCAT AGATACCGAG CCTTTCTGGG GCGCCGATGG CCAGACGCTC TATTTCACCT CCGACCGGGC CGGCAAGCCG CAGATCTATC GGCAGACCAT CGGTGGAGGG GCGGAGCGGG TGAGCTTCGT GGGTAACTAC AATGCCAACC CGAAACTGTC GGCCGACGAG AAGACCCTGG TGATGATCCA CCGGCAGGAT GGCTACACCA ACTTCAAGGT GGCGGCCCAG GACCTCCAAC GTGGTACTCT GCGGGTATTG TCGGACACCA GTCTGGACGA GTCGCCCACT GTCGCGCCCA ATGGCACCAT GCTAATCTAC GCCACCCGTC ATCAGGGAAG GGGAGTCTTG ATGCTCGCCT CGATCAACGG CAGGGTCAGG CTCCCGCTTC CTACCGCGCA AGGCGAGGTT CGCGAGCCGT CTTGGTCTCC CTACCTGAAG TGA
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Protein sequence | MNTLIRLALF GLALLAGIAQ AADPLVVTSG TARATPIAVV PFGWQGGSVM SDDMAEIVGN DLRNSGVFEP IPRQNMISQP TGPGEIIYRD WNALGAQYVL VGNIVPAGGR LQVQYALMNV ATEQQVLAGS VSGSGDQVRD MAHYIADQAF EKLTGIKGAF STRLLYVTAE RMGGGTRYTL QRADYDGARA VILLQSREPI LSPRFAPDGR RIAYVSFEQK RPRIFIQHID TGRREQITNF EGLNGAPAFS PDGSRLAFVL SKDGNPEIYV MNLASRQLQR VTNHFGIDTE PFWGADGQTL YFTSDRAGKP QIYRQTIGGG AERVSFVGNY NANPKLSADE KTLVMIHRQD GYTNFKVAAQ DLQRGTLRVL SDTSLDESPT VAPNGTMLIY ATRHQGRGVL MLASINGRVR LPLPTAQGEV REPSWSPYLK
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