| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_36640 |
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| Symbol | tolB |
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| ID | 7762559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3724943 |
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| End bp | 3726235 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643806532 |
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| Product | translocation protein TolB |
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| Protein accession | YP_002800786 |
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| Protein GI | 226945713 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.239695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATACCC TGATTCGTCT CGCCCTGTTC GGATTGGCCT TGTTGGCCGG CATTGCCCAG
GCGGCCGATC CGTTGGTGGT GACCAGCGGT ACCGCGCGTG CCACGCCTAT CGCCGTGGTG
CCCTTCGGTT GGCAGGGCGG TAGCGTGATG AGCGACGACA TGGCCGAGAT CGTCGGCAAC
GACCTGCGCA ATTCGGGTGT CTTCGAGCCG ATTCCCCGGC AGAACATGAT CAGCCAGCCG
ACCGGCCCGG GCGAGATCAT CTATCGCGAC TGGAATGCAT TGGGTGCCCA GTATGTGCTG
GTCGGCAACA TAGTTCCTGC CGGCGGGCGC CTGCAGGTGC AGTATGCGCT GATGAACGTG
GCCACCGAGC AGCAGGTGCT GGCCGGCTCC GTCAGCGGCA GTGGCGACCA GGTACGCGAC
ATGGCCCACT ATATCGCCGA CCAGGCGTTC GAGAAGCTCA CCGGCATCAA GGGAGCCTTT
TCCACCCGAC TGCTCTATGT CACCGCCGAG CGCATGGGCG GCGGCACCCG CTATACCTTG
CAACGAGCCG ACTACGACGG TGCTCGGGCC GTGATCCTGT TGCAATCCCG CGAGCCGATC
CTGTCGCCGC GCTTTGCGCC CGATGGCCGA CGCATCGCCT ATGTTTCCTT CGAGCAGAAG
CGTCCGCGCA TCTTCATTCA GCATATCGAT ACCGGTCGCC GCGAACAGAT CACCAATTTC
GAAGGACTCA ACGGTGCGCC GGCCTTCTCG CCGGATGGTT CCCGCCTGGC CTTCGTGCTG
TCCAAGGACG GCAATCCGGA AATCTACGTG ATGAACCTGG CCAGCCGGCA GTTGCAGCGG
GTCACCAACC ACTTCGGCAT AGATACCGAG CCTTTCTGGG GCGCCGATGG CCAGACGCTC
TATTTCACCT CCGACCGGGC CGGCAAGCCG CAGATCTATC GGCAGACCAT CGGTGGAGGG
GCGGAGCGGG TGAGCTTCGT GGGTAACTAC AATGCCAACC CGAAACTGTC GGCCGACGAG
AAGACCCTGG TGATGATCCA CCGGCAGGAT GGCTACACCA ACTTCAAGGT GGCGGCCCAG
GACCTCCAAC GTGGTACTCT GCGGGTATTG TCGGACACCA GTCTGGACGA GTCGCCCACT
GTCGCGCCCA ATGGCACCAT GCTAATCTAC GCCACCCGTC ATCAGGGAAG GGGAGTCTTG
ATGCTCGCCT CGATCAACGG CAGGGTCAGG CTCCCGCTTC CTACCGCGCA AGGCGAGGTT
CGCGAGCCGT CTTGGTCTCC CTACCTGAAG TGA
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| Protein sequence | MNTLIRLALF GLALLAGIAQ AADPLVVTSG TARATPIAVV PFGWQGGSVM SDDMAEIVGN
DLRNSGVFEP IPRQNMISQP TGPGEIIYRD WNALGAQYVL VGNIVPAGGR LQVQYALMNV
ATEQQVLAGS VSGSGDQVRD MAHYIADQAF EKLTGIKGAF STRLLYVTAE RMGGGTRYTL
QRADYDGARA VILLQSREPI LSPRFAPDGR RIAYVSFEQK RPRIFIQHID TGRREQITNF
EGLNGAPAFS PDGSRLAFVL SKDGNPEIYV MNLASRQLQR VTNHFGIDTE PFWGADGQTL
YFTSDRAGKP QIYRQTIGGG AERVSFVGNY NANPKLSADE KTLVMIHRQD GYTNFKVAAQ
DLQRGTLRVL SDTSLDESPT VAPNGTMLIY ATRHQGRGVL MLASINGRVR LPLPTAQGEV
REPSWSPYLK
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