| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_36130 |
|---|
| Symbol | |
|---|
| ID | 7762507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3681193 |
|---|
| End bp | 3681702 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643806480 |
|---|
| Product | transposase of insertion sequence ISRm10-1, orfB C-terminus protein |
|---|
| Protein accession | YP_002800735 |
|---|
| Protein GI | 226945662 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3335] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGATCTTCG TCGACGAAAC CGCCGCCTCG ACGAACCTGG CCCGCCTGCG GGGCTGGGCC
CCTCGCGGCG AGCGCTGCCG GGCCGCGATC CCCCACGGCC ACTGGAAAAC CACGACCTTT
ACCGCCGGCC TGCGGGTGGA TGGCCTGAGC GCGCCGCTGG TGCTCGATGG CGCCATGAAC
GGCCCGGTCT TCCTGGCCTA TGTCGGGCAG GTTCTGGTAC CCGAGCTGAC GCCCGGCGAT
ATCGTGGTGA TGGACAACCT GCCGGCCCAC AAGGTGGTGG GGGTACGCCA GGCCATCGAA
GGCGCAGGAG CCACACTGCG CTACTTGCCA CCCTATAGCC CCGACCTGAA CCCGATCGAG
ATGGCCTTCT CCAAGCTCAA GGCACTGCTG AGAAAGGCGG CGGCGCGGAC CGTGCCGCAG
CTGTGGCAGA GCATTGGCGA GGCGATTGCG CAGTTCTCGG CGCAGGACTG CAGGCACTAC
TTCGAGGCCG CCGGATATGA ATTGGGATAA
|
|---|
| Protein sequence | MIFVDETAAS TNLARLRGWA PRGERCRAAI PHGHWKTTTF TAGLRVDGLS APLVLDGAMN
GPVFLAYVGQ VLVPELTPGD IVVMDNLPAH KVVGVRQAIE GAGATLRYLP PYSPDLNPIE
MAFSKLKALL RKAAARTVPQ LWQSIGEAIA QFSAQDCRHY FEAAGYELG
|
|---|
| |