| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_35940 |
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| Symbol | traF |
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| ID | 7762488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3665788 |
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| End bp | 3666312 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643806461 |
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| Product | conjugative transfer signal peptidase TraF |
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| Protein accession | YP_002800716 |
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| Protein GI | 226945643 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGCGG GCTTCGCCGC CGTCGGCCTC GCTGCGCTGG CCTGGGCGGC TTTCGTGCAG
CCGCTGCCGC GCCTGATCTA CAACCCGTCC GACAGCGTTC CGGTCGGCTG GTATCGCGTG
CAGCCGCTTG ACCATCAGGC CGCCTCGCTG CCACGTCGGC TGGAAGTGGG CAGCATCGTC
CTGACCCGAT TGCCCGCCGA CGCTGGCGTG CTTGCTGCGC AGCGCGGCTA CCTGCCGACA
CACGTTCCGC TGCTCAAACG TGTGGGCGCG ATCGCGCCGC AACACGTCTG CATCGTCGCC
CGTCAGGTTC GCATCGACGG CGTGCCTGCC GCCGCCGCGC TGCCTGCCGA CCGGCTGGGC
CGGCCGCTGC CATCCTTGCA GCTTTGCCGC CACCTCGAAC CGGCCGAGCT GTTCCTGTTG
AGCATGACCA ATCCGGCATC ATTCGACAGC CGTTATTTCG GCCCGGTCAG CGCATCCGCC
GTGATCGGCG TCGCGCATCC GGTCTGGCTG GAGACGCGCC CATGA
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| Protein sequence | MLAGFAAVGL AALAWAAFVQ PLPRLIYNPS DSVPVGWYRV QPLDHQAASL PRRLEVGSIV
LTRLPADAGV LAAQRGYLPT HVPLLKRVGA IAPQHVCIVA RQVRIDGVPA AAALPADRLG
RPLPSLQLCR HLEPAELFLL SMTNPASFDS RYFGPVSASA VIGVAHPVWL ETRP
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