Gene Avin_35920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_35920 
Symbol 
ID7762486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3662423 
End bp3663337 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID643806459 
ProductRegulatory protein, LysR family 
Protein accessionYP_002800714 
Protein GI226945641 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGCC AGAACATCAA TCGTGCCTTC GAGATGGAAG TGTTCATCGC GGTGGTAGCC 
GCCGAAGGCT TCACCGCCGC GGCCGAGCCG CTGGGCATGA CGGCTTCGGC CGTCAGCAAG
CTCATCCATC GGTTGGAAAC ACGCCTGGGC ACGAAGCTGC TGCATCGCAC CACGCGCAAG
CTGCAACTCA CGCCCGAAGG CGGCGCGTTC CATGAACGCT GCCTGCGCAT CCTCGACGAC
ATCGGCTGCG CCGAGCACGA AGCGGCGCAG GCGGGATCGC CGCGCGGACG CGTGCGGATC
AACAGCCACG TGGCCTTCGG CGTCCACTAC CTGTTGCCGC GTTTGCCGGA GTTTCTGGGC
TGCTACCCGG ACGTTCAGGT AGACGTGACG CTGAGCGACA TCGTGGTCGA TCTTCTGGAC
GACCGCAGCG ACGTGGCGAT CCGCACCGGG CCGCTGCCGG ATTCGCGGCT GACCCAACGG
CGAATTGGCG CCAGCGGCCT GGTGGTGGTG GCTTCGCCCG ACTACCTGCG GCGCGCAAAC
ACCCCCGAAC GACCCGAAGA CCTGCGCCAG CATCGGCGCC TGGGCTTCAA CTACGCCCGG
CATGTCGATG CCTGGCCCTT CATCGACGGT GACGGCGCGC GGATCGCCAT CGCACCGTCG
GGCGACCTGC GGCTGGGCGA CGGCGAGAGC ATGCGCCAGA TGGCGCTGGC CGGGGTCGGT
GTGGCTCGGC TGGCGCGTTA CCACGTCGGG GCCGATCTCG CCGCTGGCAG GCTGCTGGCC
TTGCTGGAAA ATTACGATGC TGGCGCCGTG GAGGACATCC ATGCGGTCTT CGTCGGCCCT
GGCCGCCATG TGCCGGCGAG GGTCAGGGTG CTGCTCGATT TCCTGGCCGA ACGGGTTGCG
CAGGATTTGG CCTGA
 
Protein sequence
MSRQNINRAF EMEVFIAVVA AEGFTAAAEP LGMTASAVSK LIHRLETRLG TKLLHRTTRK 
LQLTPEGGAF HERCLRILDD IGCAEHEAAQ AGSPRGRVRI NSHVAFGVHY LLPRLPEFLG
CYPDVQVDVT LSDIVVDLLD DRSDVAIRTG PLPDSRLTQR RIGASGLVVV ASPDYLRRAN
TPERPEDLRQ HRRLGFNYAR HVDAWPFIDG DGARIAIAPS GDLRLGDGES MRQMALAGVG
VARLARYHVG ADLAAGRLLA LLENYDAGAV EDIHAVFVGP GRHVPARVRV LLDFLAERVA
QDLA