Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_35770 |
Symbol | |
ID | 7762471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3648318 |
End bp | 3649796 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643806444 |
Product | Major Facilitator Superfamily transporter |
Protein accession | YP_002800699 |
Protein GI | 226945626 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.255098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATGA CGACCACTAC GCTATCGACT GCACAACCCG CCGGCCGCAA GGCATGGTTC GGCCTTTTCA CCGTTCTTGC CCTCGTCCTG CTGGTGGCGA TGGACGGCTC GGTGCTGTAC CTCGCCATGC CGCGCGTCAC CTCCTCGATC CTGCCGACGG CAGACCAGGC GCTCTGGATT CTCGACATTT ACGGCTTCGT CGTGGGGTCG CTGCTGATCA CCTTCGGCAG CGTCGGGGAT CGCTACGGGC GATTGAGGCT GATGATGGCC GGCGCCATCA TTTTTGGACT GGGGTCGCTG GGCGTGGCGT ACTCGACCAC GCCCGAAGCC ATGATCGCGT TTCGTGCGCT GATGGGCTTG GGCGGTGCCA CGCTGCTGCC CTCGGGGCTG GCCATCGTCA GCGCTTTGTT TCCCGATCCG CGCCAACGGG CGCAGGCCAT CGGCATCTTC GCGGCGACGT TCGCGGCGGG CTTTGCCATC GGGCCAGTGA TCGGCGGGCT GCTGCTGCAA CGCTTCGATT GGGGTGTGGT GTTCCTGATC AACGTGCCGG TGGTGCTGGC CTTCCTGCTG GCTGCGCCAA TTCTGCTGCG CGAAGTGCGC GCGGCCCGCT ATGGCCGCAT CGACCTTCCG AGCCTGTTGC TGTCCTTCGC CGGCATCCTG CTGTTCACCT ATTCGATCAA AAGCGCGGCA GCAGTGGGAT TCACGGCACC GCAGGTCGTG ATGGGCATCG TCGGCATCGC CGCGCTGGCG CTGTTTATCC GCCGGCAGAC GAAGATCGCG TTCCCGCTAT TGGATCTGAG CCTGTTCAAA GACCGCATCT TCTCGATCGC CATCCTGACC GGCCTACTGT CGCTGGTGGT CTGGTCGGCC GCAGGGTACT TGTCGGGCAT CTACCTGCAA TCTGTGCTGG GCTTCGAGGT GTTCACCGCG GCGCTGCTGA CCCTGCCGGG TGCCGTGGTG CTCACCGCCA CCTGTGTCGG CACGAGCCGT ATCGTCGAGC GCATCGGCCG CAAGGCCGCG CTGGTCGCCA CGCATCTGTT GATCAGCGCG GGCGTGTTCC TGCTGCTGTT CACGACGACC GAGGCTGGCG CGATCGCATT TGTGGCCTCG ACGGTGATTG CCGGGATCGG GTACGGCCTG TCCTTTAGTT TGGTGGCCGA GATCGCAGTG TCGGCGGTGC CGCCCGAGCG CGCAGGCGCA GCCGGCTCCA TCGCGGAAAC CAGCAACGAG ATCGGCAATG CCTTGGGTAT CACCCTGTTG GGATCGCTGG CGGCGCTGGT CTTCCGGCTG TCGGGCCCAG GCGTGGCCGG CACCTTGAAT GAAACCCTCG ACCACGCGGA GGTAGCGGCA GAGGCCGTGA TGCAGGCCAA GGAGGCGTTC CTGTCGGGGC TGCACCTGGC CGTTGGCGTG GGTGGACTGC TCACGCTCCT GGTCGGAGTC GTGGCCTGGC TCTGGTTGCC GCGCAAGCTA CCGGAATAA
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Protein sequence | MTMTTTTLST AQPAGRKAWF GLFTVLALVL LVAMDGSVLY LAMPRVTSSI LPTADQALWI LDIYGFVVGS LLITFGSVGD RYGRLRLMMA GAIIFGLGSL GVAYSTTPEA MIAFRALMGL GGATLLPSGL AIVSALFPDP RQRAQAIGIF AATFAAGFAI GPVIGGLLLQ RFDWGVVFLI NVPVVLAFLL AAPILLREVR AARYGRIDLP SLLLSFAGIL LFTYSIKSAA AVGFTAPQVV MGIVGIAALA LFIRRQTKIA FPLLDLSLFK DRIFSIAILT GLLSLVVWSA AGYLSGIYLQ SVLGFEVFTA ALLTLPGAVV LTATCVGTSR IVERIGRKAA LVATHLLISA GVFLLLFTTT EAGAIAFVAS TVIAGIGYGL SFSLVAEIAV SAVPPERAGA AGSIAETSNE IGNALGITLL GSLAALVFRL SGPGVAGTLN ETLDHAEVAA EAVMQAKEAF LSGLHLAVGV GGLLTLLVGV VAWLWLPRKL PE
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