Gene Avin_35770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_35770 
Symbol 
ID7762471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3648318 
End bp3649796 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content65% 
IMG OID643806444 
ProductMajor Facilitator Superfamily transporter 
Protein accessionYP_002800699 
Protein GI226945626 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.255098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGA CGACCACTAC GCTATCGACT GCACAACCCG CCGGCCGCAA GGCATGGTTC 
GGCCTTTTCA CCGTTCTTGC CCTCGTCCTG CTGGTGGCGA TGGACGGCTC GGTGCTGTAC
CTCGCCATGC CGCGCGTCAC CTCCTCGATC CTGCCGACGG CAGACCAGGC GCTCTGGATT
CTCGACATTT ACGGCTTCGT CGTGGGGTCG CTGCTGATCA CCTTCGGCAG CGTCGGGGAT
CGCTACGGGC GATTGAGGCT GATGATGGCC GGCGCCATCA TTTTTGGACT GGGGTCGCTG
GGCGTGGCGT ACTCGACCAC GCCCGAAGCC ATGATCGCGT TTCGTGCGCT GATGGGCTTG
GGCGGTGCCA CGCTGCTGCC CTCGGGGCTG GCCATCGTCA GCGCTTTGTT TCCCGATCCG
CGCCAACGGG CGCAGGCCAT CGGCATCTTC GCGGCGACGT TCGCGGCGGG CTTTGCCATC
GGGCCAGTGA TCGGCGGGCT GCTGCTGCAA CGCTTCGATT GGGGTGTGGT GTTCCTGATC
AACGTGCCGG TGGTGCTGGC CTTCCTGCTG GCTGCGCCAA TTCTGCTGCG CGAAGTGCGC
GCGGCCCGCT ATGGCCGCAT CGACCTTCCG AGCCTGTTGC TGTCCTTCGC CGGCATCCTG
CTGTTCACCT ATTCGATCAA AAGCGCGGCA GCAGTGGGAT TCACGGCACC GCAGGTCGTG
ATGGGCATCG TCGGCATCGC CGCGCTGGCG CTGTTTATCC GCCGGCAGAC GAAGATCGCG
TTCCCGCTAT TGGATCTGAG CCTGTTCAAA GACCGCATCT TCTCGATCGC CATCCTGACC
GGCCTACTGT CGCTGGTGGT CTGGTCGGCC GCAGGGTACT TGTCGGGCAT CTACCTGCAA
TCTGTGCTGG GCTTCGAGGT GTTCACCGCG GCGCTGCTGA CCCTGCCGGG TGCCGTGGTG
CTCACCGCCA CCTGTGTCGG CACGAGCCGT ATCGTCGAGC GCATCGGCCG CAAGGCCGCG
CTGGTCGCCA CGCATCTGTT GATCAGCGCG GGCGTGTTCC TGCTGCTGTT CACGACGACC
GAGGCTGGCG CGATCGCATT TGTGGCCTCG ACGGTGATTG CCGGGATCGG GTACGGCCTG
TCCTTTAGTT TGGTGGCCGA GATCGCAGTG TCGGCGGTGC CGCCCGAGCG CGCAGGCGCA
GCCGGCTCCA TCGCGGAAAC CAGCAACGAG ATCGGCAATG CCTTGGGTAT CACCCTGTTG
GGATCGCTGG CGGCGCTGGT CTTCCGGCTG TCGGGCCCAG GCGTGGCCGG CACCTTGAAT
GAAACCCTCG ACCACGCGGA GGTAGCGGCA GAGGCCGTGA TGCAGGCCAA GGAGGCGTTC
CTGTCGGGGC TGCACCTGGC CGTTGGCGTG GGTGGACTGC TCACGCTCCT GGTCGGAGTC
GTGGCCTGGC TCTGGTTGCC GCGCAAGCTA CCGGAATAA
 
Protein sequence
MTMTTTTLST AQPAGRKAWF GLFTVLALVL LVAMDGSVLY LAMPRVTSSI LPTADQALWI 
LDIYGFVVGS LLITFGSVGD RYGRLRLMMA GAIIFGLGSL GVAYSTTPEA MIAFRALMGL
GGATLLPSGL AIVSALFPDP RQRAQAIGIF AATFAAGFAI GPVIGGLLLQ RFDWGVVFLI
NVPVVLAFLL AAPILLREVR AARYGRIDLP SLLLSFAGIL LFTYSIKSAA AVGFTAPQVV
MGIVGIAALA LFIRRQTKIA FPLLDLSLFK DRIFSIAILT GLLSLVVWSA AGYLSGIYLQ
SVLGFEVFTA ALLTLPGAVV LTATCVGTSR IVERIGRKAA LVATHLLISA GVFLLLFTTT
EAGAIAFVAS TVIAGIGYGL SFSLVAEIAV SAVPPERAGA AGSIAETSNE IGNALGITLL
GSLAALVFRL SGPGVAGTLN ETLDHAEVAA EAVMQAKEAF LSGLHLAVGV GGLLTLLVGV
VAWLWLPRKL PE