Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_35720 |
Symbol | trbB |
ID | 7762466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3643354 |
End bp | 3644406 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643806439 |
Product | P-type conjugative transfer ATPase TrbB |
Protein accession | YP_002800694 |
Protein GI | 226945621 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.469898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG TACCGAAGTC ATCCACCACC GCCGCTCTGG ATCGCCGCAT TCAGATGCTG CGCACGGCAA TGGGGCCGCT GATCGCCGCC GCGCTGGAAG ACCCGGACGT GGTGGAAATC ATGCTCAACC CCGACCGCAC CTTGTGGGTG GATCGGCTGT CGTCAGGCCG CGCGCCGCTG GGCGTCGAGC TGCCCGAAGC CGATGGTGAA CGCATCATCC GTCTTGTCGC GGCCCACGTC GGCGCGGAAG TGCATCGCGG CCAGCCGCTG CTGACTGCCG AGCTGCCGGA GACGGGCGAA CGCTTCGAGG GCATCTTGCC GCCGGCTGCA CCGGGGCCGG CGTTCGCGCT GCGCAAGCGC GCCGTGAACA TCATCGGCCT GGACCGCTAT GTGGCCGACG GCATCCTGAC CGCCGGCCAG GCGGACTTCC TGCGCCGCGC CGTGCGCGAG CGGCAGAACG TCCTGATCGC AGGCGGCACC AGCACCGGCA AGACCACGCT CGCCAACGCC TTGCTGGCCG AAATCGCCGC CACCGGCGAC CGCGTGCTGG TGCTCGAAGA CACCATCGAA CTGCAATGCG CGGCCCGCGA CCACGTTCCG CTGCGCACGC GCGCCGGCGT CGTGTCGATG CAGGAACTGG TGCGCGCCAC GATGCGCCTG CGGCCGGATC GGGTGATCGT CGGCGAGGTG CGCGGCGGCG AAGCCCTGGA CTTGGTGAAG GTGTGGGGCA CCGGCCATCC AGGTGGCATC GCCACCATCC ACGCCGGCTC CGCGCTGGGC GCGCTGCTGC GGCTGGAGCA ACTGATCCTC GAAGTCGTGG TGAACCCGCC GCGTGCGCTG ATCGCCGAGG CGGTCAACGT GGTGATCCAC ATCGCCGGGC GTGGCCGCAA GCGCCACGTC GAGAGCATTG CCCGCGTCGT CGGCTTCGAC GCCGCCGGCT ACCAACTGGC GGACGCGCTG GAAACGCCGT TTCCCGCGCT GCCGCCGGTT TCCCTCGCAG CCACCGCCGC TGCGCCTTTT CCGTCCCCCG ACTCACTTGG AGAACTGCCA TGA
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Protein sequence | MSAVPKSSTT AALDRRIQML RTAMGPLIAA ALEDPDVVEI MLNPDRTLWV DRLSSGRAPL GVELPEADGE RIIRLVAAHV GAEVHRGQPL LTAELPETGE RFEGILPPAA PGPAFALRKR AVNIIGLDRY VADGILTAGQ ADFLRRAVRE RQNVLIAGGT STGKTTLANA LLAEIAATGD RVLVLEDTIE LQCAARDHVP LRTRAGVVSM QELVRATMRL RPDRVIVGEV RGGEALDLVK VWGTGHPGGI ATIHAGSALG ALLRLEQLIL EVVVNPPRAL IAEAVNVVIH IAGRGRKRHV ESIARVVGFD AAGYQLADAL ETPFPALPPV SLAATAAAPF PSPDSLGELP
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