| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_35690 |
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| Symbol | trbE |
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| ID | 7762463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3640230 |
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| End bp | 3642680 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643806436 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_002800691 |
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| Protein GI | 226945618 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACC TTGCCGAATA CCGCCAGCGG CCCGCGCTGC TGGCCGACTG GCTGCCCTGG
GCCGGGCTGG TCGCGCCGGG TGTCGTCTTG AACAAGGATG GCAGTTTCCA GCGCACGGCG
CGCTTTCGCG GGCCTGATCT GGACAGCGCC ACGCAAGGCG AGCTGATCGC CACGTCGGCG
CGGCTCAACA ACGCGCTGCG CCGCCTGGGT TCGGGCTGGG CATTGTTCAT CGAGGCCGAG
CGCCGGCCGG CGGCGGACTA TCCGCACTCC GACTTTCCTG AACCGCTTTC CTGGCTGGTC
GATGAAGAAC GCCGCGCGGC CTTCGAGGAA TCGGGGCATC ACTTCGAGAG CGCCTATCAC
CTGACGCTCG CGTACCTGCC GCCGGAGGAA TCGCGCGCCC GCGCGGCCAA GCTGCTCTAC
GAGAACTCCC CCGGCGACGG CGTGGACTGG CGTGGCCGGC TCGATACCTT CGTGGCGGAA
ACCGATCGCG TGTTCGACCT GCTCGACGGC GTGATGCCGG AAATCGCCTG GCTCGATGAT
GCCGGCACGC TAACCGGCCT GCACGCGACG GTTTCGACGC GGCGCTGCCG GCTGGGCGTT
CCCGAAGTTC CGTTCCATAT CGACGCGCTG CTGGCCGACT GCGCCCTGGT CGGTGGCCTT
GCGCCGATGC TGGGCGACCA ACACCTGCGC GTGGTGTCGG TGCGAGGCTT TCCGACTTCG
ACGTGGCCCG GGATTCTGGA CGACCTCAAC CGCCTGGGCT TTGGCTACCG CTGGAGCACG
CGCTTTCTCT GCATGGACAA GGCGGAAGCA GAAAAAGAAC TTGGCCGCCT GCGCCGCCAG
TGGTTTGCGA AACGGAAGAA CGTCGTCGCG CTGCTACGCG AAACGATCTT CCAGCAGGAA
AGCCCGCTGG TCGATACCGA CGCCAGCAAC AAGGCGGCCG ACGCCGATGC CGCCTTGCAG
GAGCTGGGCG GCGATCAGGT GGCCTTCGGC TACCTCACCG CCACGGTGAC GGTGCTCGAT
GCCGACCCGG CCGCGGCGGA CGAGAAGCTG CGCATGGTGG AGCGCGTCAT CCAGGGCCGG
GGTTTCGTGA CCATTCCGGA AACCCTCAAT GCCGTCGATG CGTGGCTGTC GTCCATTCCC
GGCAATGCCT ATGCGAACGT GCGCCAGCCC ATCGTTTCGA CGCTGAATCT GGCGCACATG
ATGCCGCTGT CGGCGGTATG GGCTGGGCCG GAGAAGAACG ACCACCTCGA CGGCCCGCCG
CTGATCGTCA CCCGCACCGA TGGCGCGACG CCTTTTCGCT TGGTCACTCA CATCGGCGAC
GTAGGCCACA CACTAGTCGC CGGGCCGACC GGCATGGGCA AGTCGGTACT GCTTGCCATC
CTGGCGATGC AGTTCCGGCG CTATCCCGGC TCGCGCATCT TCGCTTTCGA CATGGGCCGC
TCCATGCGGG CGACTGTGTT GGGCTTGGGC GGCGAGCACT ACGACCTCGG CGCCGATGGT
GGCATCGCGT TCCAGCCCTT GGCCCGTATC GAGCAGGAAG GCTATCGCAC CTGGGCGGCC
GAATGGGTGG AAGGCCGCCT GCTGCATGAA GGCGTGACCG TCGGCCCGGA CGAGAAGGCG
ACCATCTGGT CGGCGCTGGG CAGCCTCGCG GGTGCCCCGG TGGAACAGCG CACGCTGACC
GGGCTTTCAG TGCTGCTGCA ATCGAACGCG CTGCGCCAGG CGCTGTCGCC GTATGTGCTC
GGCGGCGCGC ACGGGAAGCT GCTGGACGCC GACCGCGACC GGCTCGGCAG CGGCGACGTG
CAGGGCTTCG AGATGGAAGA ACTGATGCAC AGCCCTGCCG CCGTGCAAGC GGTGCTGCGC
TATCTGTTCG CCCGCTTCGA CGAGCGTTTC GACGGTGCGC CCACGCTGCT GATCCTCGAT
GAAGCCTGGC TGTTTCTCGA TGAGCCGTCC TTTGCCGCCC GCATCCGGCA ATGGCTCAAG
ACACTGCGCA AGAAGAACGT GTCGGTCATC TTCGCCACAC AGAGTCTGGC GGACATTAAG
GATTCGACCA TCGCGCCGGC CATCATCGAA AGCTGCGCCA GCCGGATTTT CTTGCCTAAC
CCGCAGGCCA CCGAGCCGCA GATTCGCACG ATCTACGAGG GCTTCGGCCT CAACAGCCGG
CAAATCGAAA TCGTCGCCAC CGCGCAGCCC AAGCAGGACT ACTACTACCA ATCGCGCCTG
GGAAACCGCC TGTTCGACCT CGACCTGGGG CCGGCCGCGC TCGCCTTCGC GGGCGCATCC
ACACCGCAAG ACCAACGCGA CATCGACCGC GTGCTGACGC AGGCCGGCGC CCCCGGCTTC
GCCGGCGCGT GGCTGCGCCA TCGCGGCCTC GATTGGGCCG CCGATCTGCT GCCGGCCTCG
CCGGCGGCGG CTTCTTTCCT CGCTTCTCAA CCGCTGGAGG TTTCGCCATG A
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| Protein sequence | MLNLAEYRQR PALLADWLPW AGLVAPGVVL NKDGSFQRTA RFRGPDLDSA TQGELIATSA
RLNNALRRLG SGWALFIEAE RRPAADYPHS DFPEPLSWLV DEERRAAFEE SGHHFESAYH
LTLAYLPPEE SRARAAKLLY ENSPGDGVDW RGRLDTFVAE TDRVFDLLDG VMPEIAWLDD
AGTLTGLHAT VSTRRCRLGV PEVPFHIDAL LADCALVGGL APMLGDQHLR VVSVRGFPTS
TWPGILDDLN RLGFGYRWST RFLCMDKAEA EKELGRLRRQ WFAKRKNVVA LLRETIFQQE
SPLVDTDASN KAADADAALQ ELGGDQVAFG YLTATVTVLD ADPAAADEKL RMVERVIQGR
GFVTIPETLN AVDAWLSSIP GNAYANVRQP IVSTLNLAHM MPLSAVWAGP EKNDHLDGPP
LIVTRTDGAT PFRLVTHIGD VGHTLVAGPT GMGKSVLLAI LAMQFRRYPG SRIFAFDMGR
SMRATVLGLG GEHYDLGADG GIAFQPLARI EQEGYRTWAA EWVEGRLLHE GVTVGPDEKA
TIWSALGSLA GAPVEQRTLT GLSVLLQSNA LRQALSPYVL GGAHGKLLDA DRDRLGSGDV
QGFEMEELMH SPAAVQAVLR YLFARFDERF DGAPTLLILD EAWLFLDEPS FAARIRQWLK
TLRKKNVSVI FATQSLADIK DSTIAPAIIE SCASRIFLPN PQATEPQIRT IYEGFGLNSR
QIEIVATAQP KQDYYYQSRL GNRLFDLDLG PAALAFAGAS TPQDQRDIDR VLTQAGAPGF
AGAWLRHRGL DWAADLLPAS PAAASFLASQ PLEVSP
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