Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_35490 |
Symbol | frdC |
ID | 7762444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3622353 |
End bp | 3623246 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643806418 |
Product | LysR family transcriptional regulator protein |
Protein accession | YP_002800673 |
Protein GI | 226945600 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTCGGG AACACTACAG CGAGTTGCTC GCCTTGATAG CCGTTGCACG GGAACGCAGC TTCACCCGCG CAGCCGCCCA GCTCGGCATC TCCCAGTCGA TGCTCAGCCA TACGATCCGT GGGCTGGAAG CCCGTCTCGG GGTGCGACTG CTGACGCGGA CCACGCGCAG CGTATCGGTC ACGGAGGCCG GCGAACGGCT GTTGCGCGTG GTCGCCCCCC GGCTCAAGGA CATCGAGTCG GAGCTGCGGC ATGTCGCCGA GCTGAGCGAA ACAGCGGCCG GCACGATCCG CATCACCGCC ACCGAACATG CCATCGACAC CCTGCTGTGG CCGAAGCTCT CCGAGATCCT GCCCGCCTAC CCGAAGATCA AGGTGGAGCT GAATTCCGAC TACGCCCTCA CCGATATCGT CCAGGGCCGG TACGACTTCG GCGTTCGCCT GGGCGATGGG TTGACCAGGG ACAGCTCGGC CGTGCGCATC GCGCCCGACC TGCAATTCGC CATCGTCGGC GCGCCGTCGT ATTTCGCTTC ACGCGCGATG CCCGACAAAC CCCAGGACCT GGCGAACCAC GAGTGCATCA ATCTGCGGCT CCCGACACGG GGCAACCTGT ACGCCTGGGA ACTCAAGAAG AGCCAGAGCG AGTCGAATGT GCGGGTGGAG GGCCAGTTGG TGTTCAACGG TATCTACCAG ATCCTGAACG CCGCGTTGTC GGGGTTCGGA CTGGCCTACG TTCCTGAAGA TCTGGCCCGT CCGCATCTCG AATCGGGACG CTTGCTGCCC GTGATGAAAA GCTGGTGGCG CAAGTTTCCC GGCTATCACC TCTACTACTC CAACCAGCAT GAAATCTCAC GAGCCATGCA GATCCTGATC GAGGCGCTGC GCTACAGGAA ATAG
|
Protein sequence | MPREHYSELL ALIAVARERS FTRAAAQLGI SQSMLSHTIR GLEARLGVRL LTRTTRSVSV TEAGERLLRV VAPRLKDIES ELRHVAELSE TAAGTIRITA TEHAIDTLLW PKLSEILPAY PKIKVELNSD YALTDIVQGR YDFGVRLGDG LTRDSSAVRI APDLQFAIVG APSYFASRAM PDKPQDLANH ECINLRLPTR GNLYAWELKK SQSESNVRVE GQLVFNGIYQ ILNAALSGFG LAYVPEDLAR PHLESGRLLP VMKSWWRKFP GYHLYYSNQH EISRAMQILI EALRYRK
|
| |