| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_35330 |
|---|
| Symbol | |
|---|
| ID | 7762428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 3608618 |
|---|
| End bp | 3609730 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643806402 |
|---|
| Product | lipoprotein |
|---|
| Protein accession | YP_002800657 |
|---|
| Protein GI | 226945584 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3317] Uncharacterized lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAC TGGCCGGGCT CTCCGCCCTT GCCGCGATCC TTTCGAGTGC CAGCGGCTGT
GGCTGGCTGT GGGGAGAGCA TGGGTATTTC CGTGACCGCG GCAGCGATTA TCTCGAGGCA
CGGCAGACCG CTCCGATGCG CTTGCCAGCG GATGTCGAGG TCAAGCGCAT CGATCCGCTA
CTGCCGGTGC CTTTGAATGT CGCCGATTTG CAACACGGCT CTGACTTCGA GGTGCCGCGC
CCCCAGGCGT TGCAGAGCGG GCAGGAGGTC AACGAGTTCA GCCTGCAGCA GAGTGGTGAC
TCTCGCTGGC TCGTGGCTCA GCGTGCGCCA GCGGAGGTCT GGCCGATGCT CCGGCAGTTT
TTCGAGGATA ACGGCTTCAG CCTCTCCGAG GAGCGCCTTT CCGCCGGTGA GTTCATCACC
GCCTGGCAAC CGCTCGACGC ACTGTCCGTA CCTTTGGCGC GCCGCCTGGG CGGTCGTGTC
TCCGGGCAGA CGGGCGGGGG CGAGGTCCGG GTGCATGTGC GTGTCGAACC CGGTGTTCAG
CGCAACTCCA GCGAGATTTT CGTGAGCAGT GCGTTGCGTC CGTCCGGTAG CGGCTCCGGC
GATGGAGCGG CCGGTCGTGC CGATGCCGGT CTGGATGCAG CGTTGCTCGA CGAGATGAAT
GCCAGTCTGA CGCGTAGCGC CGAGCGTGGC GGTTCGGTTT CCCTGCTGGC CGCCCGCGAC
TTCGATGCGC CGAGCCGTGT CACCCTTTCG CAAGATGGCA ATGGCAACCC CTTCCTGAAC
CTGGATGCCG ATTTCGACCG GGCCTGGTCG AGCATCGGTC GTGCCCTGGA AATGGGCAAT
GTACGGGTCG AGGACATCAA CCGCAGCCTC GGGGTGTATT ACATCAACCT CGCCGAAAAG
GCCGACAGGA ATGAGAAACC GGGGCTTCTC GGGCGCCTGT TTGGCGGGAA GGAGGACCCG
AAGGAAGTGG AGGCTCGCGC CGAACGCTAT CAGGTACGCC TGACCCGGAT TGCGGAGGGC
ATCCAGGTCA CGGTGGAAAA GGACATGAAT ACCTTCGCTC CGGAAGGGGT GGCGCGCCGG
GTGCTGAACA TGCTTCAGGA ACATCTGGGT TAA
|
|---|
| Protein sequence | MKRLAGLSAL AAILSSASGC GWLWGEHGYF RDRGSDYLEA RQTAPMRLPA DVEVKRIDPL
LPVPLNVADL QHGSDFEVPR PQALQSGQEV NEFSLQQSGD SRWLVAQRAP AEVWPMLRQF
FEDNGFSLSE ERLSAGEFIT AWQPLDALSV PLARRLGGRV SGQTGGGEVR VHVRVEPGVQ
RNSSEIFVSS ALRPSGSGSG DGAAGRADAG LDAALLDEMN ASLTRSAERG GSVSLLAARD
FDAPSRVTLS QDGNGNPFLN LDADFDRAWS SIGRALEMGN VRVEDINRSL GVYYINLAEK
ADRNEKPGLL GRLFGGKEDP KEVEARAERY QVRLTRIAEG IQVTVEKDMN TFAPEGVARR
VLNMLQEHLG
|
|---|
| |